Protein Alignment cnc and skn-1

DIOPT Version :9

• Sequence 1: NP_001262864.1
• Gene: cnc / 42743
• FlyBaseID: FBgn0262975
• Length: 1430
• Species: Drosophila melanogaster
• Sequence 2: NP_741404.1
• Gene: skn-1 / 177343
• WormBaseID: WBGene00004804
• Length: 623
• Species: Caenorhabditis elegans
• Alignment Length: 631
• Identity: 136/631 - (21%)
• Similarity: 204/631 - (32%)
• Gaps: 195/631 - (30%)

  Fly   665 HHGHHQGR---------MPRLNRSVSM-----ERLQDFATYFSPIPSMVGGVSDMSPYPHHYPGY 715
            :|.|.|.:         .|:.||.:.:     :|:.::.....|:.:    |..|.....|.|..
 Worm   104 NHQHQQEQDFNGQSKYDYPQFNRPMGLRWRDDQRMMEYFMSNGPVET----VPVMPILTEHPPAS 164

  Fly   716 SYQASPSNGAPGTPGQHGQYGS------------------GANATLQPPPP----------PPPP 752
            .:...||...|.|..:: :|.|                  |...|.|..|.          ....
 Worm   165 PFGRGPSTERPTTSSRY-EYSSPSLEDIDLIDVLWRSDIAGEKGTRQVAPADQYECDLQTLTEKS 228

  Fly   753 HHAAMLHHPNAALGDICP---TG-----------QPHYGHNLGSAVTSSM-HLTNSSHEADGAAA 802
            ..|.:....||...|:..   .|           |.|.........|.:: |.|..:...|..
 Worm   229 TVAPLTAEENARYEDLSKGFYNGFFESFNNNQYQQKHQQQQREQIKTPTLEHPTQKAELEDDL-- 291

  Fly   803 AAAAYKVEHDLMYYGNTSSDINQTDGFINSIFTDEDLHLMDMNESFCRMVDNSTSNNSSVLGLPS 867
                  .:.||   .....|:::.:|.:|.:|.::..|              ...||.|:    |
 Worm   292 ------FDEDL---AQLFEDVSREEGQLNQLFDNKQQH--------------PVINNVSL----S 329

  Fly   868 SGHVSNGSGSSAQLGAGNPHGNQAN-----GASGGVGSMSGSAVGAGATGMTADLLASGGAGAQG 927
            .|.|.                ||||     ........:|.|.:...:|.....|...
 Worm   330 EGIVY----------------NQANLTEMQEMRDSCNQVSISTIPTTSTAQPETLFNV------- 371

  Fly   928 GADRLDASSDSAVSSMGSERVPS----LSDGEW-GEGSDSAQD-YHQGKYGGPYDFSYNNNSRLS 986
                  ..|.:....:.:|.||:    .|:..: |..:||.|. ...|:.  .||.||.
 Worm   372 ------TDSQTVEQWLPTEVVPNDVFPTSNYAYIGMQNDSLQAVVSNGQI--DYDHSYQ------ 422

  Fly   987 TATRQPPVAQKKHQLYGKRDPHKQTPSALPPTAPPAAATAVQS-----QSIKYEY-DAGYASSGM 1045
             :|.|.|::.   .:.|.....:||.::  |.:....|||.||     .|.::.: |....||..
 Worm   423 -STGQTPLSP---LIIGSSGRQQQTQTS--PGSVTVTATATQSLFDPYHSQRHSFSDCTTDSSST 481

  Fly  1046 ASGGISEPGAMGPALSKDYHHHQPYGMGA--SGSAFSGDYTVRPSPRTSQDLVQLNHTYSLPQGS 1108
            .|...||........|...|..:.||..|  |||.    |....|||:||..:::.....|..|.
 Worm   482 CSRLSSESPRYTSESSTGTHESRFYGKLAPSSGSR----YQRSSSPRSSQSSIKIARVVPLASGQ 542

  Fly  1109 GSLPRPQARDKKPLVATKTASKGASAGNSSSVGGNSSNLEEEHLTRDEKRARSLNIPISVPDIIN 1173
                |.:.|..|                                  ||:.|....:|:|...|..
 Worm   543 ----RKRGRQSK----------------------------------DEQLASDNELPVSAFQISE 569

  Fly  1174 LPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQ 1219
            :.:.|..:.|....|||.|..|||.|||||||||||:.||:|:.|:
 Worm   570 MSLSELQQVLKNESLSEYQRQLIRKIRRRGKNKVAARTCRQRRTDR 615

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cnc	NP_001262864.1	bZIP_CNC	1192..1259	CDD:269846	19/28 (68%)
		coiled coil	1193..1255	CDD:269846	18/27 (67%)
skn-1	NP_741404.1	bZIP	588..>614	CDD:304365	18/25 (72%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	50	1.000	Domainoid score	I7815
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S7370
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm14594
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR24411
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.050