DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and Kcnj13

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_446060.1 Gene:Kcnj13 / 94341 RGDID:621661 Length:360 Species:Rattus norvegicus


Alignment Length:334 Identity:125/334 - (37%)
Similarity:194/334 - (58%) Gaps:19/334 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 SRRVRKRVVFKHGECNVVQGNVAKRRRRYLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFGFIWW 201
            |:|.| |:|.|.|. :.:|.:.|:|...||:|.:..|:|.:|||.:|||:||||..|..|..:|:
  Rat    14 SQRYR-RMVTKDGH-STLQMDGAQRGLVYLRDAWGILMDMRWRWMMLVFSASFVVHWLVFAVLWY 76

  Fly   202 IIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNRYVTEECPEA 266
            .:|..:.|||..:  :..|:     .||:||..:::..:||.:|:|||.|||||..:.:.:||.|
  Rat    77 AVAEMNGDLEIDH--DVPPE-----NHTICVKHITSFTAAFSFSLETQLTIGYGTMFPSGDCPSA 134

  Fly   267 IFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHI 331
            |..:.||.:.|:.::||:.|...||::|||.||.::.|:..||:.|:||.|.|:|:|.:.|.|.:
  Rat   135 IALLAIQMLLGLMLEAFITGAFVAKIARPKNRAFSIRFTDLAVVAHKDGKPNLIFQVANTRPSPL 199

  Fly   332 IEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADG--GEDRLMFIWPTTIVHKIDRNSPLYMLSAS 394
            ....|.|.:.:::  :.||:   ||..:....||  .|:...||:|.|..|.|..:|||..|...
  Rat   200 TSVRVSAVLYQER--ENGEL---YQTSVDFHLDGISSEECPFFIFPLTYYHTITPSSPLATLLQH 259

  Fly   395 DMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGEYEVDYTLFNNTY 459
            : ....||:||.|..:.|.||...|.|:||||||::..|||..::: |...|||:|....|:.|.
  Rat   260 E-TPSHFELVVFLSAMQEGTGEICQRRTSYLPSEIMLHHRFAALMT-RGSKGEYQVKMENFDKTV 322

  Fly   460 -DVDTPLCS 467
             :..||:.|
  Rat   323 PEHPTPVVS 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 56/149 (38%)
IRK_C 302..476 CDD:465439 60/169 (36%)
Kcnj13NP_446060.1 IRK 21..163 CDD:460023 56/149 (38%)
Selectivity filter. /evidence=ECO:0000305 119..124 4/4 (100%)
IRK_C 170..331 CDD:465439 59/167 (35%)

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