DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and kcnj1a.3

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001038641.1 Gene:kcnj1a.3 / 569137 ZFINID:ZDB-GENE-050420-256 Length:368 Species:Danio rerio


Alignment Length:339 Identity:134/339 - (39%)
Similarity:206/339 - (60%) Gaps:12/339 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 YRQTRFSSRRVRKRVVFKHGECNVVQGNVAKRRR-RYLQDIFTTLVDAQWRWTLLVFAASFVFSW 193
            ::..|...|..:.|:|.|.|.||:...||..|.| .|::|.:||.|:.:||:.:|.|.|||..||
Zfish     9 FKDYRLKQRIRKNRLVTKDGRCNIEFDNVMHRNRFAYVRDFWTTFVETRWRFIILYFVASFTLSW 73

  Fly   194 AFFGFIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNRY 258
            ..||.||:.:|.::.||.:   :|..||      ||.||..|.:|..||::|:|||.|:.|||.|
Zfish    74 FIFGLIWYWLARSNGDLLW---QNPPPD------HTPCVYSVYDMTYAFIFSLETQNTVIYGNVY 129

  Fly   259 VTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMFRV 323
            ||::||..:..:.||.|.|:.|..|..|||..|::.|||||:|:.||.:||||.:.|..||..||
Zfish   130 VTDQCPAGVALIIIQTIIGILISIFWCGIVITKITLPKKRAKTITFSESAVICPKKGTLCLQIRV 194

  Fly   324 GDMRKSHIIEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNSPL 388
            .::||:.:|.:.:..:::|..|| .||.:...|..:....|.|:|.|.|:.|.|:.|.||::||.
Zfish   195 ANLRKTLMIGSQIYGKLLRTTVT-GGETVILDQVNIDFMVDAGKDNLFFVCPLTLYHIIDKSSPF 258

  Fly   389 YMLSASDMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGEYEVDYT 453
            :.::...:.::.||:||.|:|:.|:|..:.|.|:||:|.|::||:.|:.::| |.|.|.|:||::
Zfish   259 FDMAVDTLHQQDFELVVFLDGMAETTSSSCQVRTSYIPQEIMWGYDFLPIIS-RSEEGRYQVDFS 322

  Fly   454 LFNNTYDVDTPLCS 467
            .|.....|.|..||
Zfish   323 NFAKVVPVPTAHCS 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 64/150 (43%)
IRK_C 302..476 CDD:465439 61/166 (37%)
kcnj1a.3NP_001038641.1 IRK 24..166 CDD:460023 64/150 (43%)
IRK_C 173..342 CDD:465439 61/166 (37%)

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