DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and kcnj1a.5

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001038634.2 Gene:kcnj1a.5 / 568823 ZFINID:ZDB-GENE-050420-120 Length:370 Species:Danio rerio


Alignment Length:380 Identity:141/380 - (37%)
Similarity:216/380 - (56%) Gaps:34/380 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 LTRYRQTRFS----SRRVRK-RVVFKHGECNVVQGNVA-KRRRRYLQDIFTTLVDAQWRWTLLVF 185
            :||..:.||.    .||:|| |:|.|.|.||:..|||. |....|:.|.:||||:.:||:.||.|
Zfish     1 MTRSLRQRFKDYRLERRIRKNRLVTKDGHCNIEFGNVLHKNGFAYVLDFWTTLVETRWRFILLYF 65

  Fly   186 AASFVFSWAFFGFIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQT 250
            .||:..||..||.:|:.:|..:.||.:   :|..||      |..|...|::|.:|||.::||||
Zfish    66 VASYSLSWLIFGLLWYWLARNNGDLYW---QNPPPD------HKPCAINVNDMTNAFLNALETQT 121

  Fly   251 TIGYGNRYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDG 315
            .:|.||.:||:.||.::..:.||.:.|:||..|..|||..|::.|||||:|:.||::||||.:.|
Zfish   122 GMGCGNLFVTDLCPGSVAVLTIQMVVGLFIGIFWCGIVMTKITLPKKRAKTITFSKSAVICPKKG 186

  Fly   316 VPCLMFRVGDMRKSHIIEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVH 380
            ..||..||.::||:.:|.:.:..:::|..|| .||.:...|..:....|.|:|.|.|:.|.|:.|
Zfish   187 TLCLQIRVANLRKTLMIGSQIYGKLLRTTVT-GGETVILDQVSIDFMVDAGKDNLFFMCPLTLYH 250

  Fly   381 KIDRNSPLYMLSASDMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKET 445
            .||::||.:.::...:.::.||:||.|:|:.|||..:.|.|:||:|.|::||:.|:.::|..||.
Zfish   251 IIDKSSPFFDMAVDTLHQQDFELVVFLDGMDESTSSSCQVRTSYIPREIMWGYDFLPIISRSKER 315

  Fly   446 GEYEVDYTLFNNTYDVDTPLCS-----------------AKQLDELKSEYSKSAK 483
             .|.||::.......|.|..||                 .|.::....|..||.|
Zfish   316 -RYRVDFSNIAKVVPVPTAHCSRCYHNEPGNHLHLHGTDTKSVEVFDMELPKSTK 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 61/150 (41%)
IRK_C 302..476 CDD:465439 61/190 (32%)
kcnj1a.5NP_001038634.2 IRK 24..166 CDD:460023 61/150 (41%)
IRK_C 173..342 CDD:465439 60/170 (35%)

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