DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irk1 and kcnj1b

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001092204.1 Gene:kcnj1b / 556608 ZFINID:ZDB-GENE-070620-9 Length:375 Species:Danio rerio


Alignment Length:332 Identity:129/332 - (38%)
Similarity:202/332 - (60%) Gaps:16/332 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 RRVRK-RVVFKHGECNVVQGNVAKRRR-RYLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFGFIW 200
            |::|: |:|.|.|.||:..|....:.. .:|:|.:||.|:..|.:.:|:|||:|..||..||.:|
Zfish    16 RKIRRTRLVTKDGHCNIKFGTTEYQSHFAFLKDFWTTFVEIHWCFVILLFAAAFTGSWFVFGLLW 80

  Fly   201 WIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNRYVTEECPE 265
            :.:|.::.||..:.             .|.|:..::::.:|||||:|||||||||.|.:|..||.
Zfish    81 YSLAKSNGDLSESQ-------------QTKCIENINSLTTAFLYSLETQTTIGYGGRALTGHCPG 132

  Fly   266 AIFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSH 330
            .:..:.||.:.|..|..||.|::.||:|.||:||:|:.||..|||....|..||..||.::||:.
Zfish   133 TVALLIIQSLMGAIINCFMCGLILAKISLPKRRAKTVAFSETAVIRLWKGNLCLQIRVANLRKTL 197

  Fly   331 IIEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNSPLYMLSASD 395
            :|.:|:..:::|..:|.|||.:...|..:....|.|:|.|.|:.|.||.|.||::||...::|.:
Zfish   198 LIGSHIYGKLLRTTITPEGETIILDQVNVDFSVDAGKDNLFFVCPLTIYHVIDKSSPFADMAADN 262

  Fly   396 MLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGEYEVDYTLFNNTYD 460
            :..:.||:||.|:|..|||.::.|.|:||||.|:.||:.|:.|:| |.:||:|.:|.:.|:.|..
Zfish   263 LQLQDFELVVFLDGTAESTSLSCQVRTSYLPREIKWGYVFLPVIS-RTKTGKYRIDLSNFSKTQQ 326

  Fly   461 VDTPLCS 467
            .|||.|:
Zfish   327 ADTPHCA 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 55/150 (37%)
IRK_C 302..476 CDD:465439 66/166 (40%)
kcnj1bNP_001092204.1 IRK 24..162 CDD:460023 55/150 (37%)
IRK_C 171..338 CDD:465439 66/164 (40%)

Return to query results.
Submit another query.