DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and kcnj13

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001039014.2 Gene:kcnj13 / 555691 ZFINID:ZDB-GENE-070129-1 Length:358 Species:Danio rerio


Alignment Length:336 Identity:108/336 - (32%)
Similarity:172/336 - (51%) Gaps:27/336 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 RKRVVFKHGECNVVQGNVAKRRRR----YLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFGFIWW 201
            |:|:|.|.|. :..:||.....|.    .|:|::.|.:..:|||.:|.|..||:..|..|..:|:
Zfish    20 RRRLVSKDGR-SQTRGNTRGGSRETCFSALRDLWGTWLALRWRWVVLAFCGSFLLHWLLFAVLWY 83

  Fly   202 IIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNRYVTEECPEA 266
            ::|..:.||:..:..:..|.      |.:||..|:...:||.:::|||.|||||..|...:||.|
Zfish    84 LLARVNGDLDVLDHDSPPPG------HVLCVKHVNGFTAAFSFALETQLTIGYGTMYPNADCPTA 142

  Fly   267 IFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHI 331
            |..:.:|.:.|:.::||:.|...||.|||:||...:|||..||:|.:.|..||||||.:::...:
Zfish   143 IALLALQMLLGLMLEAFITGAFVAKFSRPQKRCDGILFSPQAVVCEQKGQRCLMFRVCNLQPQPL 207

  Fly   332 IEAHVRAQIIRKKVTKEGEVLPFYQQELHIGAD--GGEDRLMFIWPTTIVHKIDRNSPLYMLSAS 394
            ::..|.|.:..::...|     .:|..|....|  |.....:|:.|.|..|.::.::|.....:|
Zfish   208 VDVSVSAVLYEERDDHE-----LHQTALEFSIDNLGSRSCPLFLSPLTFFHPLNPSTPFINNPSS 267

  Fly   395 DMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVS-FRKETGEYEVDYTL---- 454
               :..||:||.|....||||.....|:||||.|:.:|:.|..|.| .:.:|.......|:    
Zfish   268 ---QTHFELVVFLTATQESTGSGYHKRTSYLPDEIQYGYCFSKVTSVHQNKTPNMRYFDTVPCPL 329

  Fly   455 -FNNTYDVDTP 464
             ..||:..|||
Zfish   330 TLANTHTTDTP 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 50/153 (33%)
IRK_C 302..476 CDD:465439 52/171 (30%)
kcnj13NP_001039014.2 None

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