DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and kcnj11l

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001012387.1 Gene:kcnj11l / 497647 ZFINID:ZDB-GENE-050222-2 Length:432 Species:Danio rerio


Alignment Length:353 Identity:164/353 - (46%)
Similarity:231/353 - (65%) Gaps:15/353 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 LTRYRQ----TRFSSRRVRKRVVFKHGECNVVQGNVAKRRRRYLQDIFTTLVDAQWRWTLLVFAA 187
            |||..:    :|...:..|.|.:.|.|.|||...|: :.:.|:|||:|||:||.:|:.:||:|.:
Zfish    14 LTRLAEDAQPSRIRPKSQRARFITKSGSCNVAHKNI-REQGRFLQDVFTTMVDLKWQHSLLIFTS 77

  Fly   188 SFVFSWAFFGFIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTI 252
            :|:.||..|..:||::|:||.|||..:.....|        ..|||.:.:..||||:|:|.|.||
Zfish    78 AFLCSWMLFAMVWWLLAFAHGDLEPRDPNEPGP--------VPCVTSIHSFTSAFLFSIEVQVTI 134

  Fly   253 GYGNRYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVP 317
            |:|.|.||||||.||..:.||.|.|:.|.|.|:|.||.|.::..:||:||:|||||||..|:|.|
Zfish   135 GFGGRMVTEECPLAIIVLIIQNILGLIINAIMLGCVFMKTAQANRRAETLIFSRNAVIAPRNGRP 199

  Fly   318 CLMFRVGDMRKSHIIEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKI 382
            .|||||||:|||.||.|:::.|:||:.||.||||:|..|.::.:......:.:..:.|..|.|.|
Zfish   200 TLMFRVGDLRKSMIISANIQLQVIRRTVTAEGEVIPVCQLDIQVENPLRSNGIFLVSPLIISHTI 264

  Fly   383 DRNSPLYMLSASDMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGE 447
            ||.||||.|||..|..|..|::|:||||:|:||:|.|||:||:|.|:|||.|||::::  :|.|.
Zfish   265 DRGSPLYELSAQSMATEDLEIIVILEGVVETTGITMQARTSYIPEEILWGRRFVSIMT--EEDGR 327

  Fly   448 YEVDYTLFNNTYDVDTPLCSAKQLDELK 475
            |.|||:.|.||..|..|..|||:||:.:
Zfish   328 YSVDYSKFGNTVPVRMPALSAKELDQTR 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 66/149 (44%)
IRK_C 302..476 CDD:465439 89/174 (51%)
kcnj11lNP_001012387.1 IRK 36..177 CDD:460023 66/149 (44%)
IRK_C 184..353 CDD:465439 88/170 (52%)

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