DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and Kcnj6

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_037324.1 Gene:Kcnj6 / 25743 RGDID:2959 Length:425 Species:Rattus norvegicus


Alignment Length:416 Identity:182/416 - (43%)
Similarity:262/416 - (62%) Gaps:34/416 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 KAVSESPGPLTRYRQTRFSSRRVRKRVVFKHGECNVVQGNVAKRRRRYLQDIFTTLVDAQWRWTL 182
            :|..:.|..::|.|..|...|.||     |.|:|||..||| :...|||.||||||||.:||:.|
  Rat    37 QARDDLPRHISRDRTKRKIQRYVR-----KDGKCNVHHGNV-RETYRYLTDIFTTLVDLKWRFNL 95

  Fly   183 LVFAASFVFSWAFFGFIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVE 247
            |:|...:..:|.|||.|||:|||...|:::          :.:.:.|.|||.::..:||||:|:|
  Rat    96 LIFVMVYTVTWLFFGMIWWLIAYIRGDMDH----------IEDPSWTPCVTNLNGFVSAFLFSIE 150

  Fly   248 TQTTIGYGNRYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICH 312
            |:||||||.|.:|::|||.|..:.||.:.|..:.|||||.:|.|:|:|||||:||:||.:|||..
  Rat   151 TETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISM 215

  Fly   313 RDGVPCLMFRVGDMRKSHIIEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTT 377
            |||..||||||||:|.|||:||.:||::|:.|.|.|||.:|..|.::::|...|:|||..:.|..
  Rat   216 RDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLI 280

  Fly   378 IVHKIDRNSPLYMLSASDMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFR 442
            |.|:|::.||.:.:|.:.:.||..|:||:|||::|:||||.||||||:.||:|||:||..|::. 
  Rat   281 ISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTL- 344

  Fly   443 KETGEYEVDYTLFNNTYDVDTPLCSAKQLDELKSEYSKSAKCVNAPFADRTLSASLFQRIASAAS 507
             |.|.|||||..|:.||:..||..|||:|.||.:.            |:..||.|:..::...|.
  Rat   345 -EDGFYEVDYNSFHETYETSTPSLSAKELAELANR------------AELPLSWSVSSKLNQHAE 396

  Fly   508 VDHLDPASDESLDSGRLQIRSHSIPN 533
            ::    ..:|..:...|..|:..:.|
  Rat   397 LE----TEEEEKNPEELTERNGDVAN 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 69/149 (46%)
IRK_C 302..476 CDD:465439 90/173 (52%)
Kcnj6NP_037324.1 IRK 59..198 CDD:460023 71/154 (46%)
Selectivity filter. /evidence=ECO:0000250 154..159 4/4 (100%)
IRK_C 205..374 CDD:465439 88/170 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 392..425 5/31 (16%)
PDZ-binding 422..425
Blue background indicates that the domain is not in the aligned region.

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