DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and Kcnj1

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_063120966.1 Gene:Kcnj1 / 24521 RGDID:2957 Length:474 Species:Rattus norvegicus


Alignment Length:406 Identity:168/406 - (41%)
Similarity:239/406 - (58%) Gaps:33/406 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 ASNINSTGGESSGSGTQL------------------SRKESILGSFHRQIRRSIKAVSESPGPLT 128
            |.|.|....|.|.|...|                  |:|...:|:.:.|||...:.:.:.   |.
  Rat    47 AKNANEARREQSSSQLGLTSDFQPMKRMSLEQRPGFSQKRGWVGTRYGQIRALTERMFKH---LR 108

  Fly   129 RYRQTR-FSSRRVRKRVVFKHGECNVVQGNV-AKRRRRYLQDIFTTLVDAQWRWTLLVFAASFVF 191
            |:..|. |...|.|.|:|.|.|.||:..||| |:.|..:..||:||::|.:||:.:.||..:|:.
  Rat   109 RWFVTHIFGRSRQRARLVSKEGRCNIEFGNVDAQSRFIFFVDIWTTVLDLKWRYKMTVFITAFLG 173

  Fly   192 SWAFFGFIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGN 256
            ||..||.:|:::||.|.||         |:.......|.||..::.|.||||:|:|||.|||||.
  Rat   174 SWFLFGLLWYVVAYVHKDL---------PEFYPPDNRTPCVENINGMTSAFLFSLETQVTIGYGF 229

  Fly   257 RYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMF 321
            |:|||:|..|||.:..|.|.||.|.:||.|.:.||:|||||||:|:.||:||||..|.|..||:.
  Rat   230 RFVTEQCATAIFLLIFQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLI 294

  Fly   322 RVGDMRKSHIIEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNS 386
            ||.::|||.:|.:|:..::::..:|.|||.:...|..::...|.|.:.|.||.|.||.|.||.||
  Rat   295 RVANLRKSLLIGSHIYGKLLKTTITPEGETIILDQTNINFVVDAGNENLFFISPLTIYHIIDHNS 359

  Fly   387 PLYMLSASDMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGEYEVD 451
            |.:.::|..:.::.||:||.|:|.:|||..|.|.|:||:|.|||||:|||.:||..|| |:|.||
  Rat   360 PFFHMAAETLSQQDFELVVFLDGTVESTSATCQVRTSYVPEEVLWGYRFVPIVSKTKE-GKYRVD 423

  Fly   452 YTLFNNTYDVDTPLCS 467
            :..|..|.:|:||.|:
  Rat   424 FHNFGKTVEVETPHCA 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 67/150 (45%)
IRK_C 302..476 CDD:465439 74/166 (45%)
Kcnj1XP_063120966.1 None

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