DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and Kcnj12

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_017452453.1 Gene:Kcnj12 / 117052 RGDID:621660 Length:529 Species:Rattus norvegicus


Alignment Length:339 Identity:179/339 - (52%)
Similarity:244/339 - (71%) Gaps:13/339 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 RRVRKRVVFKHGECNVVQGNVAKRRRRYLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFGFIWWI 202
            ||.|.|.|.|:|:||:...|:.::.:|||.|:|||.||.:||:.||:|:.:|:.||..||.|:|:
  Rat   142 RRCRNRFVKKNGQCNIEFANMDEKSQRYLADMFTTCVDIRWRYMLLIFSLAFLASWLLFGIIFWV 206

  Fly   203 IAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNRYVTEECPEAI 267
            ||.||.|||....:.::|          ||.||...|:|||:|:|||||||||.|.||||||.|:
  Rat   207 IAVAHGDLEPAEGRGRTP----------CVLQVHGFMAAFLFSIETQTTIGYGLRCVTEECPVAV 261

  Fly   268 FTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHII 332
            |.:..|.|.|..|.:||:|.:.||::||||||||||||.|||:..|||..|||:|||::|||||:
  Rat   262 FMVVAQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVALRDGKLCLMWRVGNLRKSHIV 326

  Fly   333 EAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNSPLYMLSASDML 397
            |||||||:|:.:||:|||.:|..|.::.:|.|.|.||:..:.|.||:|:||..|||:.:|..|:.
  Rat   327 EAHVRAQLIKPRVTEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEIDEASPLFGISRQDLE 391

  Fly   398 KERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGEYEVDYTLFNNTYDV- 461
            .:.||:||:|||::|:|.||||||||||.:|:||||||..|:.  :|..:|::||:.|:.||:| 
  Rat   392 TDDFEIVVILEGMVEATAMTTQARSSYLANEILWGHRFEPVLF--EEKNQYKIDYSHFHKTYEVP 454

  Fly   462 DTPLCSAKQLDELK 475
            .||.||||.|.|.|
  Rat   455 STPRCSAKDLVENK 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 71/149 (48%)
IRK_C 302..476 CDD:465439 96/175 (55%)
Kcnj12XP_017452453.1 FAM222A <24..>117 CDD:464598
IRK_N 104..148 CDD:462486 3/5 (60%)
IRK 149..289 CDD:460023 71/149 (48%)
IRK_C 296..468 CDD:465439 95/173 (55%)
Blue background indicates that the domain is not in the aligned region.

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