DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and kcnj10a

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_003198936.1 Gene:kcnj10a / 100538267 ZFINID:ZDB-GENE-130726-1 Length:425 Species:Danio rerio


Alignment Length:381 Identity:139/381 - (36%)
Similarity:204/381 - (53%) Gaps:53/381 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 GGESSGSGTQLSRKESILGSFHRQIRRSIKAVSESPGPLTRYRQTRFSSRRVRKRVVFKHGECNV 153
            ||.|:|:|                           |..|.|           |:||:.|.|..||
Zfish    36 GGTSTGNG---------------------------PAALRR-----------RRRVLSKDGRSNV 62

  Fly   154 VQGNVAKRRRRYLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFGFIWWIIAYAHNDLEYTNLKNQ 218
            ...:|:.|...||:|::||.:|.|||:.|.:|:|:|..:|..||.:|:::|..|.||    |:..
Zfish    63 RIEHVSGRGTLYLRDLWTTFLDMQWRYKLFLFSATFAGTWFVFGVLWYLVALVHGDL----LEFD 123

  Fly   219 SPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNRYVTEECPEAIFTMCIQCITGVFIQAF 283
            .|.     .||.||.||..:..|||:|:|:|||||||.|.:|||||.||..:.:|.:..:.::.|
Zfish   124 PPS-----NHTPCVMQVQTLTGAFLFSLESQTTIGYGFRCITEECPLAIILLIVQLVITMVMEIF 183

  Fly   284 MVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHIIEAHVRAQIIRKKVTKE 348
            :.|...||::|||||.:|:.||::||:.:.:|.||||.||.:||||.::...|..::::...|||
Zfish   184 ITGTFLAKVARPKKRGETVKFSQHAVVANHEGRPCLMIRVANMRKSLLLGCQVSGKLLQTSQTKE 248

  Fly   349 GEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNSPLYMLSA-----SDMLKERFEVVVMLE 408
            ||.:...|:.:....|...|....|.|.|..|.||.||||...:|     :|.....||::|::.
Zfish   249 GETVRLDQRNVAFQVDTSSDSPFLILPLTFYHVIDDNSPLRAWAAKGGGWTDPELADFELLVIMS 313

  Fly   409 GVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGEYEVDYTLFNNTYDVDTP 464
            ..:|.|..|.|.|:||||.|:|||:.|..|||. ..:|:|..|:..|:......||
Zfish   314 ATVEPTSATCQVRTSYLPDEILWGYEFPPVVSL-SPSGKYVADFAFFDKVAKTKTP 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 60/149 (40%)
IRK_C 302..476 CDD:465439 62/168 (37%)
kcnj10aXP_003198936.1 IRK 54..195 CDD:460023 60/149 (40%)
IRK_C 202..368 CDD:465439 60/166 (36%)

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