DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and LOC100492679

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_004916335.1 Gene:LOC100492679 / 100492679 -ID:- Length:394 Species:Xenopus tropicalis


Alignment Length:369 Identity:168/369 - (45%)
Similarity:230/369 - (62%) Gaps:26/369 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 LTRYRQTRFSSRRV-----RKRVVFKHGECNVVQGNVAKRRRRYLQDIFTTLVDAQWRWTLLVFA 186
            :||..:.|.|..:.     |.|.|.|:|.|||...|: :.:.|:|||:|||:||.:|..:||:|.
 Frog    14 ITRLAEDRASHSQYKLKTRRARFVAKNGACNVAHKNI-REQGRFLQDVFTTMVDLKWHHSLLIFT 77

  Fly   187 ASFVFSWAFFGFIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTT 251
            .:|:.||..|...||:||:||.||   ..|..|        ...|||.:.:..||||:|:|.|.|
 Frog    78 MTFICSWMLFAMAWWLIAFAHGDL---GPKRGS--------FVPCVTNIQSFTSAFLFSIEVQVT 131

  Fly   252 IGYGNRYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGV 316
            ||:|.|.|||:||.||..:.||.|:|:.|.|.|:|.:|.|.::..:||:||:||::|||..|||.
 Frog   132 IGFGGRMVTEQCPLAITVLIIQNISGLIINAVMLGCIFMKTAQANRRAETLIFSKHAVIACRDGK 196

  Fly   317 PCLMFRVGDMRKSHIIEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHK 381
            ..|||||||:|||.||.|.::.||::|..|.||||:|..|.::.:....|.:.:..:.|..:.|.
 Frog   197 YRLMFRVGDLRKSMIISASIKIQIVKKTTTAEGEVVPISQVDIQVENPVGTNSIFLVSPLIVSHT 261

  Fly   382 IDRNSPLYMLSASDMLKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETG 446
            ||..||||..||.|:..|..|||.:||||:|:||:|||||:||||.|:|||||||.:|:  :|.|
 Frog   262 IDERSPLYTFSAYDLCNEDLEVVAILEGVVETTGITTQARTSYLPDEILWGHRFVPIVT--EEEG 324

  Fly   447 EYEVDYTLFNNTYDVDTPLCSAKQLDE-------LKSEYSKSAK 483
            .|.|||:.|.||..|:.||||.|.|.|       ...::||..|
 Frog   325 RYSVDYSKFGNTVKVNGPLCSPKDLAEGRYCGLPRNGQHSKPKK 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 66/149 (44%)
IRK_C 302..476 CDD:465439 90/180 (50%)
LOC100492679XP_004916335.1 IRK 37..175 CDD:460023 66/149 (44%)
IRK_C 182..351 CDD:465439 89/170 (52%)

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