DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irk1 and kcnj9

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_031747901.1 Gene:kcnj9 / 100489771 XenbaseID:XB-GENE-25875121 Length:411 Species:Xenopus tropicalis


Alignment Length:436 Identity:187/436 - (42%)
Similarity:265/436 - (60%) Gaps:53/436 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 KAVSESPG-PLTRYRQTRFSSR--------------RVRKRVVFKHGECNVVQGNVAKRRRRYLQ 167
            :|.:..|| ..|..:.:.|..:              |.|:|.|.|.|.|||..||| :...|||.
 Frog     5 RAFTTVPGATFTNAKSSSFQHKSKLAEKAEKADRKLRRRQRYVEKDGRCNVQHGNV-RETYRYLT 68

  Fly   168 DIFTTLVDAQWRWTLLVFAASFVFSWAFFGFIWWIIAYAHNDLEYTNLKNQSPDLVANITHTVCV 232
            ||||||||.:||.:||||..::..:|.|||.|||.|||...||::          :.:.|.|.||
 Frog    69 DIFTTLVDLKWRVSLLVFILAYAITWLFFGVIWWFIAYCRGDLDH----------LEDRTWTPCV 123

  Fly   233 TQVSNMMSAFLYSVETQTTIGYGNRYVTEECPEAIFTMCIQCITGVFIQAFMVGIVFAKLSRPKK 297
            ..::..:||||:|:||:||||||:|.:|::|||.|..:.:|.|.|..:.|||||.:|.|:|:|.|
 Frog   124 NNLNGFVSAFLFSIETETTIGYGHRVITDKCPEGIVLLLLQAILGSMVNAFMVGCMFVKISQPNK 188

  Fly   298 RAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHIIEAHVRAQIIRKKVTKEGEVLPFYQQELHIG 362
            ||:||:||.:|||..||...||||||||:|.|||:||.:||::|:.|.|:|||.:|..|.::::|
 Frog   189 RAETLVFSSHAVISLRDDKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTQEGEFIPLNQTDINVG 253

  Fly   363 ADGGEDRLMFIWPTTIVHKIDRNSPLYMLSASDMLKERFEVVVMLEGVIESTGMTTQARSSYLPS 427
            .:.|:|||..:.|..|.|:|:.:||.:.:|...:.|:.||:||:|||::|:||||.|||||||..
 Frog   254 FETGDDRLFLVSPLIISHEINEHSPFWEVSKRQLEKDEFEIVVILEGMVEATGMTCQARSSYLVD 318

  Fly   428 EVLWGHRFVNVVSFRKETGEYEVDYTLFNNTYDVDTPLCSAKQLDELKSEYSKSAKCVNAPFADR 492
            ||||||||::|::.  |.|.|||||..|:.|::|.||.|||::|.|                |..
 Frog   319 EVLWGHRFMSVLTL--EDGFYEVDYNTFHQTFEVPTPSCSARELAE----------------AAA 365

  Fly   493 TLSASLFQRIASAASVDHLDPASDESLDSGRLQIRSHSIPNGVLAS 538
            .:.|.|:..|.|..         ||.::.|..:....:..||.|:|
 Frog   366 RMDAHLYWSIPSQL---------DEKVEEGTEKENFINEINGTLSS 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 72/149 (48%)
IRK_C 302..476 CDD:465439 90/173 (52%)
kcnj9XP_031747901.1 IRK 47..186 CDD:460023 72/149 (48%)
IRK_C 193..356 CDD:465439 85/164 (52%)

Return to query results.
Submit another query.