DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk1 and kcnj1

DIOPT Version :10

Sequence 1:NP_001262861.1 Gene:Irk1 / 42742 FlyBaseID:FBgn0265042 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_004916228.1 Gene:kcnj1 / 100487609 XenbaseID:XB-GENE-483960 Length:372 Species:Xenopus tropicalis


Alignment Length:352 Identity:156/352 - (44%)
Similarity:227/352 - (64%) Gaps:12/352 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 RRVRKRVVFKHGECNVVQGNVAKRRR-RYLQDIFTTLVDAQWRWTLLVFAASFVFSWAFFGFIWW 201
            :|.|.|:|.|.|.||:..|||.::.| .:|.||:||::|.:||:.:.||.::|:.||..||.:|:
 Frog    17 QRRRSRLVSKDGRCNIEFGNVEEQSRVAFLADIWTTILDLKWRYKMTVFISAFLGSWFLFGLLWY 81

  Fly   202 IIAYAHNDLEYTNLKNQSPDLVANITHTVCVTQVSNMMSAFLYSVETQTTIGYGNRYVTEECPEA 266
            .:||.|.||         |:...::.||.||..::.:.|:||:|:|||.|||||.|.|||:|..|
 Frog    82 AVAYLHKDL---------PEFNPSVNHTPCVENINGLTSSFLFSLETQVTIGYGFRCVTEQCATA 137

  Fly   267 IFTMCIQCITGVFIQAFMVGIVFAKLSRPKKRAQTLLFSRNAVICHRDGVPCLMFRVGDMRKSHI 331
            ||.:.:|.|.||.|.:||.|.:.||:|||||||:|:.||:||||..|.|..||:.||.::|||.:
 Frog   138 IFLLVVQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLL 202

  Fly   332 IEAHVRAQIIRKKVTKEGEVLPFYQQELHIGADGGEDRLMFIWPTTIVHKIDRNSPLYMLSASDM 396
            |.:|:..::::..||.|||.:...|..:....|.|.:.|.|:.|.||.|.||::||.:.:||..:
 Frog   203 IGSHIYGKLLKTTVTPEGETIILDQVNIEFTVDAGSENLFFVSPLTIYHIIDKDSPFFEMSAETL 267

  Fly   397 LKERFEVVVMLEGVIESTGMTTQARSSYLPSEVLWGHRFVNVVSFRKETGEYEVDYTLFNNTYDV 461
            |:..||:||.|:|.:|||..|.|.|:|::|.|||||:||..:||..|| |:|.||::.|:.|.:|
 Frog   268 LQHDFELVVFLDGTVESTSATCQVRTSFIPDEVLWGYRFAPLVSKTKE-GKYRVDFSNFSKTLEV 331

  Fly   462 DTPLCSAKQLDELKSEYSKSAKCVNAP 488
            :||.| |..|...|....||.|..:.|
 Frog   332 ETPHC-AFCLQNEKDAREKSKKGYDNP 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk1NP_001262861.1 IRK 145..295 CDD:460023 66/150 (44%)
IRK_C 302..476 CDD:465439 75/173 (43%)
kcnj1XP_004916228.1 IRK 24..166 CDD:460023 66/150 (44%)
IRK_C 173..345 CDD:465439 75/173 (43%)

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