DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC39-2 and atp6v0d1

DIOPT Version :10

Sequence 1:NP_651128.1 Gene:VhaAC39-2 / 42739 FlyBaseID:FBgn0039058 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001017310.1 Gene:atp6v0d1 / 550064 XenbaseID:XB-GENE-989918 Length:351 Species:Xenopus tropicalis


Alignment Length:345 Identity:156/345 - (45%)
Similarity:231/345 - (66%) Gaps:1/345 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSAPSVEVIE 67
            :.||.:.||||.|.||||.|:|...|||||.|||:|||:.:.:|.||||.....|.|..:|.||:
 Frog     7 LYFNVDSGYLEGLVRGFKAGILSQGDYLNLVQCETLEDLKLHLQSTDYGTFLANEASPLAVSVID 71

  Fly    68 RCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLRMCHPLGEFD 132
            ..|:::::.::.::|:.|.|||.:||:||.|.:|||||.||:.|..:.||:..|:..|||||.|:
 Frog    72 DKLKEKMVVEFRHMRNQSYEPLASFMDFITYSYMIDNVILLITGTLHQRSISELVPKCHPLGSFE 136

  Fly   133 QLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLG 197
            |:.|:.:|...|||::|:|:|||:|.|....:..:.|..:::||:|..||:||||.||.:|..||
 Frog   137 QMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLESFYKFCDSLG 201

  Fly   198 GNTANVMTNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTCGYLPKIALASMSTLNDTDKIRD 262
            |.||:.|..:|.||||||...|.:|:.|:::..::|.|:||.||.|....||.::..:|.::::.
 Frog   202 GTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGKLYPEGLAQLARADDYEQVKT 266

  Fly   263 VCNVFDGYGKMFDNLERDSDGMITLEDRFLMMEAKKNVQTFLQQYHFGIFYSFIKLKQLEVRNIV 327
            |.:.:..|..:|:. ..::.|..||||||...|.|.|...||.|:|||:||:|:|||:.|.||||
 Frog   267 VADYYPEYKLLFEG-AGNNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIV 330

  Fly   328 WISECIAQRQTDRINAFIPI 347
            ||:||||||...:|:.:|||
 Frog   331 WIAECIAQRHRAKIDNYIPI 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC39-2NP_651128.1 vATP-synt_AC39 12..341 CDD:426553 148/328 (45%)
atp6v0d1NP_001017310.1 vATP-synt_AC39 16..344 CDD:426553 148/328 (45%)

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