DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VhaAC39-2 and atp6v0d1

DIOPT Version :10

Sequence 1:NP_651128.1 Gene:VhaAC39-2 / 42739 FlyBaseID:FBgn0039058 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_955914.1 Gene:atp6v0d1 / 322811 ZFINID:ZDB-GENE-030131-1531 Length:350 Species:Danio rerio


Alignment Length:345 Identity:153/345 - (44%)
Similarity:230/345 - (66%) Gaps:1/345 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 MIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSAPSVEVIE 67
            :.||.:.||||.|.||||.|:|..:|||||.|||:|||:.:.:|.||||.....|.|..:|.||:
Zfish     6 LYFNVDNGYLEGLVRGFKAGILSQADYLNLVQCETLEDLKLHLQSTDYGSFLANEASPLTVSVID 70

  Fly    68 RCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKRLLRMCHPLGEFD 132
            ..|:::::.::.::|:.|.|||.:||:||.|.:|||||.||:.|..:.|::..|:..|||||.|:
Zfish    71 DKLKEKMVVEFRHMRNQSYEPLASFMDFITYSYMIDNVILLITGTLHQRAISELVPKCHPLGSFE 135

  Fly   133 QLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLG 197
            |:.|:.:|...|||::|:|:|||:|.|....:..:.|..:::||:|..||:||||.||.:|:.||
Zfish   136 QMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEIIRNTLYKAYLEAFYKFCTTLG 200

  Fly   198 GNTANVMTNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTCGYLPKIALASMSTLNDTDKIRD 262
            |.||:.|..:|.||||||...|.:|:.|:::..::|.|:||.||.|....||.::..:|.::::.
Zfish   201 GTTADTMCPILEFEADRRAFIITINSFGTELSKEDRAKLFPHCGKLYPEGLAQLARADDYEQVKA 265

  Fly   263 VCNVFDGYGKMFDNLERDSDGMITLEDRFLMMEAKKNVQTFLQQYHFGIFYSFIKLKQLEVRNIV 327
            |...:..|..:|:. ...:.|..||||||...|.|.|...||.|:||.:||:::|||:.|.||||
Zfish   266 VAEYYPEYKLLFEG-AGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFSVFYAYVKLKEQECRNIV 329

  Fly   328 WISECIAQRQTDRINAFIPI 347
            ||:||||||...:|:.:|||
Zfish   330 WIAECIAQRHRAKIDNYIPI 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC39-2NP_651128.1 vATP-synt_AC39 12..341 CDD:426553 145/328 (44%)
atp6v0d1NP_955914.1 vATP-synt_AC39 15..343 CDD:426553 145/328 (44%)

Return to query results.
Submit another query.