DRSC/TRiP Functional Genomics Resources

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Protein Alignment unk and AT1G60610

DIOPT Version :10

Sequence 1:NP_001303430.1 Gene:unk / 42738 FlyBaseID:FBgn0004395 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_176260.1 Gene:AT1G60610 / 842355 AraportID:AT1G60610 Length:340 Species:Arabidopsis thaliana


Alignment Length:361 Identity:71/361 - (19%)
Similarity:117/361 - (32%) Gaps:116/361 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 ENSLSASLANTSLLTRSSAPINIPNTTLS--------------NSINDFNSGSFAVNIPSSSLTY 432
            :|.:...|.|.|.....|      ||:|:              :.:|.|.:.:.|..:..:|...
plant     7 DNPVPQVLMNDSQFRYQS------NTSLNQLHLLGTMRAGCTIDPVNYFANDNLAPMMRLNSTRG 65

  Fly   433 SPTNHANLFNVDAFNYGGSNKLSNSLSATQNDSSLFFPSRIISPGFGDGLSISPSVRISELNTIR 497
            ..|.:.|:..       ...||..||:...|:::......:.....     :|..:|:|    ..
plant    66 RETENNNIMQ-------RQQKLQISLNYNYNNNNTVVQDEVPKQNL-----VSTGLRLS----YD 114

  Fly   498 DDINSSSVGNSLFENTLNTAKNAFSLQSLQSQNNSDLGR-------------------------- 536
            ||..:|||      .:.|.:......|||......||.|                          
plant   115 DDERNSSV------TSANGSITTPVYQSLGDNIRLDLNRQNDELDQFIKFRADQMAKGVRDIKQR 173

  Fly   537 ------------ITNELLTKNAQIHKLNGRFEDMACKLKIAELHRDKAKQ---EAQEW--KERYD 584
                        ::.:|..|:.:|..:|.:..::.          ||.||   |||.|  |.:|:
plant   174 HVTSFVTALEKDVSKKLQEKDHEIESMNKKNRELV----------DKIKQVAVEAQNWHYKAKYN 228

  Fly   585 ---LAQIQLNLPAELRD-----------LSIQKLKQLQSKLRTDLEEVDKVLYL------ENAKK 629
               :..:::||...:..           ....::|:.......| :|.....||      ....:
plant   229 ESVVNALKVNLQQVMSHGNDNNAVGGGVADHHQMKEGFGDSEID-DEAASYNYLNIPGMPSTGMR 292

  Fly   630 CMKCEENNRTVTLEPCNHLSICNTCAESVTECPYCQ 665
            |..|...|.:|.|.||.|||:|..|......||.||
plant   293 CKLCNVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQ 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unkNP_001303430.1 zf_CCCH_5 21..56 CDD:375810
zf-CCCH 273..299 CDD:459885
COG4372 484..>621 CDD:443500 34/193 (18%)
RING-HC_UNK-like 628..665 CDD:438276 14/36 (39%)
AT1G60610NP_176260.1 zf-C3HC4_3 293..334 CDD:464042 16/36 (44%)
Blue background indicates that the domain is not in the aligned region.

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