DRSC/TRiP Functional Genomics Resources

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Protein Alignment unk and AT5G47050

DIOPT Version :10

Sequence 1:NP_001303430.1 Gene:unk / 42738 FlyBaseID:FBgn0004395 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_199516.1 Gene:AT5G47050 / 834751 AraportID:AT5G47050 Length:300 Species:Arabidopsis thaliana


Alignment Length:346 Identity:75/346 - (21%)
Similarity:114/346 - (32%) Gaps:127/346 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 SKFLSFSRPLDSRSACSMDDPRENSLSASLANTSLLTRSSAPINIPNTTLSNSINDFNSGSFAVN 424
            |:|.|.:..:|:|.       |...:|:.:.    |..::||:|.|..|....|....:    .|
plant    28 SQFHSINAGVDTRK-------RAREVSSVID----LDITAAPMNPPPQTPPQVIGRRQN----PN 77

  Fly   425 IPSSSLTYSPTNHANLFNVDAFNYGGSNKLSNSLSATQNDSSLFFPSRIISPGFGDGLSISPSVR 489
            :.|:.|                      :||...|..|....|.||             |:..| 
plant    78 VVSTGL----------------------RLSREQSQNQEQRFLSFP-------------ITGDV- 106

  Fly   490 ISELNTIRDDIN------SSSVGNSLFENTLNTAKNAFSLQSLQSQNNSDLGRITNE-----LLT 543
            ..|:.:..|::|      ...:...|.||:              .:|..:|.|.|.|     |..
plant   107 AGEIKSQTDELNRFLQIQGEQLKRMLAENS--------------ERNYRELLRTTEESVRRRLRE 157

  Fly   544 KNAQIHKLNGRFEDMACKLKIAELHRDKAKQEAQEWKERYDLAQIQLNLPAELRDLSIQKLKQLQ 608
            |.|:|.|...|..::       |....:.:.||:.|:.|           |..|:   .:...||
plant   158 KEAEIEKATRRHVEL-------EARATQIETEARAWQMR-----------AAARE---AEATSLQ 201

  Fly   609 SKLR------------TDLE----EVDKVLYLENAKK--------------CMKCEENNRTVTLE 643
            ::|.            |.:|    .||.|...|:|:.              |..|...:.||...
plant   202 AQLHQAVVVAHGGGVITTVEPQSGSVDGVDEAEDAESAYVDPDRVEMIGPGCRICRRRSATVLAL 266

  Fly   644 PCNHLSICNTCAESVTECPYC 664
            ||.||.:|..|..||..||.|
plant   267 PCRHLVMCTECDGSVRICPLC 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unkNP_001303430.1 zf_CCCH_5 21..56 CDD:375810
zf-CCCH 273..299 CDD:459885
COG4372 484..>621 CDD:443500 33/163 (20%)
RING-HC_UNK-like 628..665 CDD:438276 15/51 (29%)
AT5G47050NP_199516.1 mRING-HC-C3HC5_CGRF1-like 253..287 CDD:438311 14/33 (42%)
Blue background indicates that the domain is not in the aligned region.

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