DRSC/TRiP Functional Genomics Resources

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Protein Alignment unk and AT4G35070

DIOPT Version :10

Sequence 1:NP_001303430.1 Gene:unk / 42738 FlyBaseID:FBgn0004395 Length:673 Species:Drosophila melanogaster
Sequence 2:NP_195233.2 Gene:AT4G35070 / 829659 AraportID:AT4G35070 Length:265 Species:Arabidopsis thaliana


Alignment Length:270 Identity:57/270 - (21%)
Similarity:101/270 - (37%) Gaps:71/270 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 NYGGSNKLSNSLSATQNDSSLFFPSRIISPGFGDGLSISPSVRISELNTIRDDINSSSVGNSLFE 511
            ||...|  :|.:....::.||...:.:|      |:....|..::.|. ::.|.|..::.:....
plant     8 NYNAPN--ANQIGFGGSEFSLINNNGVI------GIGNDQSYLVNNLQ-LQKDFNQHALFHHQHH 63

  Fly   512 NTLNTAKNAF----------------SLQS------LQSQNNSDLGRITNELLTKNAQIHKLNGR 554
            ....:...:|                .:|:      ||.|...::..|..::.:|...:  ::.:
plant    64 QQQQSPSQSFLAAQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLL--MSQK 126

  Fly   555 FEDMACKL----KIAELHRDKAKQEAQEWKE--RYDLAQIQ-LNLPAELRDLSIQKLKQLQSKLR 612
            .|:|:..|    ::.:|.| |.:.|.|.|:.  |.:.|.:| ||          ..|:|::.:..
plant   127 EEEMSKALNKNMELEDLLR-KMEMENQTWQRMARENEAIVQTLN----------TTLEQVRERAA 180

  Fly   613 T-----DLEEVDKVLYLEN--------AKK------CMKCEENNRT-VTLEPCNHLSICNTCAES 657
            |     :.|..|:..:...        |||      |..|..|..| |...||.||..|..|.|.
plant   181 TCYDAGEAEVEDEGSFCGGEGDGNSLPAKKMKMSSCCCNCGSNGVTRVLFLPCRHLCCCMDCEEG 245

  Fly   658 VTECPYCQVP 667
            :..||.|..|
plant   246 LLLCPICNTP 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unkNP_001303430.1 zf_CCCH_5 21..56 CDD:375810
zf-CCCH 273..299 CDD:459885
COG4372 484..>621 CDD:443500 30/170 (18%)
RING-HC_UNK-like 628..665 CDD:438276 16/43 (37%)
AT4G35070NP_195233.2 PRK10929 79..>179 CDD:236798 22/112 (20%)
zf-C3HC4_3 216..259 CDD:464042 16/40 (40%)
Blue background indicates that the domain is not in the aligned region.

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