DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unk and unk

DIOPT Version :9

Sequence 1:NP_001303430.1 Gene:unk / 42738 FlyBaseID:FBgn0004395 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_012827260.1 Gene:unk / 613106 XenbaseID:XB-GENE-969153 Length:844 Species:Xenopus tropicalis


Alignment Length:841 Identity:316/841 - (37%)
Similarity:427/841 - (50%) Gaps:205/841 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LSSQQEKPNHYT------------------------YLKEFRVEQCQSFLQHKCNQHRPFVCFNW 51
            |.:|.|||.|||                        ||||||.|||..|:||||.||||:.||:|
 Frog    25 LQAQPEKPQHYTYTYTHIPPSRLISTYTRTEHSFPLYLKEFRTEQCPLFVQHKCTQHRPYTCFHW 89

  Fly    52 HFQNQRRRRPVRKRDGTFNYSADNYCTKYDETTGICPEGDECPYLHRTAGDTERRYHLRYYKTCM 116
            ||.||||||.||:||||||||.|.|||||||||||||:.||||:||||.||||||||||||||.:
 Frog    90 HFVNQRRRRSVRRRDGTFNYSPDIYCTKYDETTGICPDSDECPFLHRTTGDTERRYHLRYYKTGI 154

  Fly   117 CVHDTDSRGYCVKNGLHCAFAHGMQDQRPPVYDIKEL---ETLQNAESTLD-------STNALNA 171
            |:|:|||:|:|.|||.|||||||..|.|.|||||:||   |.|||.:.|||       :..|.:|
 Frog   155 CIHETDSKGHCTKNGQHCAFAHGPHDLRSPVYDIRELQAMEALQNGQPTLDGGMEGQTAMAASHA 219

  Fly   172 LDKERNLMNEDPKWQDTNYVLANYKTEPCKRPPRLCRQGYACPQYHNSKDKRRSPRKYKYRSTPC 236
            :.::  ::.|:|:||||.|||.:||||.||:||||||||||||.||||||:|||||:.||||:||
 Frog   220 MIEK--ILGEEPRWQDTTYVLGHYKTEQCKKPPRLCRQGYACPYYHNSKDRRRSPRQNKYRSSPC 282

  Fly   237 PNVKHGEEWGEPGNCEAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRSVFCAFAHVE-- 299
            ||||||:|||:|..||:||:||||||||||||||||||||||||:||:|.|||..||||||||  
 Frog   283 PNVKHGDEWGDPSKCESGDSCQYCHTRTEQQFHPEIYKSTKCNDMQQSGSCPRGPFCAFAHVEQS 347

  Fly   300 --------PCSIDEKTRDHTV-YLNELISNAYPDLKAQDAFQRVDNLLNIDGNSTN--------K 347
                    |..:...|:...: |:.....::.|   ...:.....:..|:.|..::        .
 Frog   348 LVCDDLQSPSVVSSPTQTAPIMYMPSAAGDSVP---VSPSSPHAPDFSNVWGKMSHLPTSPTSAT 409

  Fly   348 MLVDALENTTN--FSKFLSFSRP--LDS-------------RSACSMDDPRENSLSASL-----A 390
            ||..:|.:.||  .|...|..:|  ||:             ...|.    ||:|:.|..     :
 Frog   410 MLCASLGSPTNPCGSPPGSLGKPHSLDNLGFHTDLPGSYKKAPGCE----REDSVGADYLKSFKS 470

  Fly   391 NTSLLTRS-------------------SAPINIPNTTLSNSINDFNSGSFAVNIPS--------- 427
            ...|.|.|                   ..|:..|   |::||:...:.|.|...||         
 Frog   471 QAKLKTHSLEHRNPEQPLLQSKQEVLGMLPMGSP---LTSSISSSITSSLAATPPSPAAISGTPG 532

  Fly   428 ---SSLTYSPTN-------HANLFNVDAFNYG----------------GSNKLSNSLSATQNDSS 466
               ::|.:.||:       .:.|.::|...:|                |...:..||  .|:.:.
 Frog   533 MNANALPFYPTSDTVESVIESALDDLDLNEFGVAALEKTFDSSSVPAAGGIMIGGSL--MQSSAP 595

  Fly   467 LFFPSRIISPGFGDGLSISPSVRISE-----------------LNT--IRDDINSSSVGNSLFEN 512
            :..|..:.|.......|.||.|.:|.                 |:|  ....:..:.:.||::|:
 Frog   596 VNIPGSLGSSASFHSTSPSPPVSLSSHFLHQTTGPHSQSDNAFLSTSATHGSLGLNGMNNSIWEH 660

  Fly   513 TLNTAKN-AFSLQSLQSQNNSDLGRITNELLTKNAQIHKLNGRFEDMACKLKIAELHRDKAKQEA 576
            .::.:.: ..|...|.....::|.|:.:||...::.|.    ::||   ..|.|:...|..|:||
 Frog   661 FVSGSYSPGTSPGFLSGPGGAELIRLRHELEEASSTIK----QWED---SWKQAKQACDAWKKEA 718

  Fly   577 QEWKERYDLAQIQLNLPAELRD---LSIQKLKQ------------------------------LQ 608
            :|..||...|.::..|..|.||   |.::||::                              :|
 Frog   719 EEANERATAASMECELAREQRDALELQLKKLQEELERVPGGQDSKMYGSMSELEGLPLATLFTIQ 783

  Fly   609 SKLRTDLEEVDKVLYLENAKKCMKCEENNRTVTLEPCNHLSICNTCAESVTECPYCQVPVI 669
            .:|..:||.|||.:|...:.:|.||::.|||:.  .|.|..:|..|.....:|.....||:
 Frog   784 KQLHANLERVDKAVYQLKSTRCPKCQDQNRTML--QCQHSVLCEMCEGEEEDCQTNITPVL 842

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unkNP_001303430.1 zf-CCCH 273..299 CDD:279036 20/25 (80%)
FhaB <311..548 CDD:225751 59/341 (17%)
zf-C3HC4_3 626..671 CDD:290631 13/44 (30%)
unkXP_012827260.1 zf_CCCH_5 61..94 CDD:375810 25/32 (78%)
zf-CCCH 319..344 CDD:366217 3/25 (12%)
COG4372 689..>822 CDD:226809
RING_Ubox 804..834 CDD:388418


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 352 1.000 Domainoid score I1003
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D316647at33208
OrthoFinder 1 1.000 - - FOG0003517
OrthoInspector 1 1.000 - - otm47897
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7783
SonicParanoid 1 1.000 - - X1211
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.950

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