DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment unk and Unk

DIOPT Version :9

Sequence 1:NP_001303430.1 Gene:unk / 42738 FlyBaseID:FBgn0004395 Length:673 Species:Drosophila melanogaster
Sequence 2:XP_003751001.1 Gene:Unk / 360663 RGDID:1309224 Length:810 Species:Rattus norvegicus


Alignment Length:806 Identity:323/806 - (40%)
Similarity:427/806 - (52%) Gaps:177/806 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLSSQQEKPNHYTYLKEFRVEQCQSFLQHKCNQHRPFVCFNWHFQNQRRRRPVRKRDGTFNYSAD 74
            :|.:|.|||.|||||||||.|||..|:||||.||||:.||:|||.||||||.:|:||||||||.|
  Rat    23 VLQAQPEKPQHYTYLKEFRTEQCPLFVQHKCTQHRPYTCFHWHFVNQRRRRSIRRRDGTFNYSPD 87

  Fly    75 NYCTKYDETTGICPEGDECPYLHRTAGDTERRYHLRYYKTCMCVHDTDSRGYCVKNGLHCAFAHG 139
            .|||||||.||:||||||||:||||.||||||||||||||.:|:|:|||:|.|.|||||||||||
  Rat    88 VYCTKYDEATGLCPEGDECPFLHRTTGDTERRYHLRYYKTGICIHETDSKGNCTKNGLHCAFAHG 152

  Fly   140 MQDQRPPVYDIKEL---ETLQNAESTLD------STNALNALDKERNLMNEDPKWQDTNYVLANY 195
            ..|.|.|||||:||   |.|||.::|::      |..|.:....|: :::|:|:||:|.|||.||
  Rat   153 PHDLRSPVYDIRELQAMEALQNGQTTVEGSIEGQSAGAASHAMIEK-ILSEEPRWQETAYVLGNY 216

  Fly   196 KTEPCKRPPRLCRQGYACPQYHNSKDKRRSPRKYKYRSTPCPNVKHGEEWGEPGNCEAGDNCQYC 260
            ||||||:||||||||||||.||||||:||||||:||||:||||||||:|||:||.||.||.||||
  Rat   217 KTEPCKKPPRLCRQGYACPYYHNSKDRRRSPRKHKYRSSPCPNVKHGDEWGDPGKCENGDTCQYC 281

  Fly   261 HTRTEQQFHPEIYKSTKCNDVQQAGYCPRSVFCAFAHVEP----------CSIDEKTRDHTV-YL 314
            ||||||||||||||||||||:||:|.|||..||||||:||          .::...|:...| |:
  Rat   282 HTRTEQQFHPEIYKSTKCNDMQQSGSCPRGPFCAFAHIEPPPLSDDVPPSSAVSSPTQPGPVLYM 346

  Fly   315 NELISNAY---------PDLKA------------------QDAFQRVDNL--LNIDGNST----- 345
            .....::.         |||.|                  ....:::.||  |...|.::     
  Rat   347 PSAAGDSVPVSPSSPHAPDLSALLCRSSGLASPPHLCSSPPGPSRKISNLEGLVFPGEASLAPGS 411

  Fly   346 ----------NKMLVDALENTTNFSKFLSFS-------RPL-----DSRSACSMDDPRENSLSAS 388
                      :::..:.|:|....:|....|       :||     |......:..|..:|:|:|
  Rat   412 YKKAPGCEREDQVGAEYLKNFKCQAKLKPHSLEPRSQEQPLLQPKQDVLGILPVGSPLTSSISSS 476

  Fly   389 LANTSLLT------RSSAP-IN---IP--------NTTLSNSINDFNSGSFAVNIPSSSLTYSPT 435
            :.::...|      .|||| :|   :|        .:.:.::::|.:...|.|.....:...|..
  Rat   477 ITSSLAATPPSPAGTSSAPGMNANALPFYPTSDTVESVIESALDDLDLNEFGVAALEKTFDNSTV 541

  Fly   436 NHANLFNVDAFNYGGSNKLSNSLSATQNDSSLFFPSRIISPGFGDGLSISPSVRIS--------- 491
            .|.:...:     ||        |..|:.:.:..|..:.|.......|.||.|.:|         
  Rat   542 PHPSNITI-----GG--------SLLQSSAPVNIPGSLGSSASFHSASPSPPVSLSSHFLQQPQG 593

  Fly   492 ----ELNTIRDDINSSSVGNSLFENTLNT------AKNAFSLQS----LQSQNNSDLGRITNELL 542
                ..||.   :.:|:...||..|.:|:      |..:||..:    |.....::|.|:..|| 
  Rat   594 HLSQSENTF---LGTSASHGSLGLNGMNSSIWEHFASGSFSPGTSPAFLSGPGAAELARLRQEL- 654

  Fly   543 TKNAQIHKLNGRFEDMACKLKIAELHRDKAKQEAQEWKERYDLAQIQLNLPAELRD--------- 598
                  .:.||..:......|.|:...|..|:||:|..||...|..:..|..|.||         
  Rat   655 ------DEANGTIKQWEESWKQAKQACDAWKKEAEEAGERASAAGAECELAREQRDALELRVKKL 713

  Fly   599 ------------------------LSIQKLKQLQSKLRTDLEEVDKVLYLENAKKCMKCEENNRT 639
                                    ||:..|..:|.:||..||:|||.::...:.||:||:|..||
  Rat   714 QEELERLHTVPEAQTLPAAPDLEALSLSTLYSIQKQLRVHLEQVDKAVFHMQSVKCLKCQEQTRT 778

  Fly   640 VTLEPCNHLSICNTCAESVTECPYCQ 665
            |.  ||.|..:|..|||. :|||.||
  Rat   779 VL--PCQHAVLCELCAEG-SECPVCQ 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
unkNP_001303430.1 zf-CCCH 273..299 CDD:279036 20/25 (80%)
FhaB <311..548 CDD:225751 59/334 (18%)
zf-C3HC4_3 626..671 CDD:290631 20/40 (50%)
UnkXP_003751001.1 CTH1 <124..318 CDD:227395 134/194 (69%)
zf-CCCH 294..318 CDD:279036 18/23 (78%)
DegS 646..>719 CDD:283127 20/79 (25%)
zf-C3HC4_3 765..801 CDD:290631 18/38 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336698
Domainoid 1 1.000 358 1.000 Domainoid score I939
eggNOG 1 0.900 - - E1_KOG1100
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 584 1.000 Inparanoid score I971
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D316647at33208
OrthoFinder 1 1.000 - - FOG0003517
OrthoInspector 1 1.000 - - otm44853
orthoMCL 1 0.900 - - OOG6_105234
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1211
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.660

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