DRSC/TRiP Functional Genomics Resources

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Protein Alignment hh and Dhh

DIOPT Version :9

Sequence 1:NP_001034065.1 Gene:hh / 42737 FlyBaseID:FBgn0004644 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_445819.1 Gene:Dhh / 84380 RGDID:620711 Length:396 Species:Rattus norvegicus


Alignment Length:408 Identity:200/408 - (49%)
Similarity:260/408 - (63%) Gaps:26/408 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 LTSLVALLLIVLPMVFSPAHSCGPGRG-LGRHR--ARNLYPLVLKQTIPNLSEYTNSASGPLEGV 125
            |..|..|.|:.|.:     .||||||| :||.|  .:.|.||:.||.:|::.|.|..||||.||.
  Rat     7 LLPLCCLALLALSV-----QSCGPGRGPVGRRRYVRKQLVPLLYKQFVPSMPERTLGASGPAEGR 66

  Fly   126 IRRDSPKFKDLVPNYNRDILFRDEEGTGADRLMSKRCKEKLNVLAYSVMNEWPGIRLLVTESWDE 190
            :.|.|.:|:|||||||.||:|:|||.:||||||::||||::|.||.:|||.|||:||.|||.|||
  Rat    67 VTRGSERFRDLVPNYNPDIIFKDEENSGADRLMTERCKERVNALAIAVMNMWPGVRLRVTEGWDE 131

  Fly   191 DYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSISSHV 255
            |.||.|:||||||||:.|.|||||::|||:|||||||||||||.|.||.||:.|||:|:|::...
  Rat   132 DGHHAQDSLHYEGRALDITTSDRDRNKYGLLARLAVEAGFDWVYYESRNHIHVSVKADNSLAVRA 196

  Fly   256 HGCFTPESTALLESGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTD-G 319
            .|||...:|..|.||.||.|.||..||.||:..|.|:.|.:.|:||:||:|::..:||.:.|: .
  Rat   197 GGCFPGNATVRLRSGERKGLRELHRGDWVLAADAAGRVVPTPVLLFLDRDLQRRASFVAVETERP 261

  Fly   320 GAVLTVTPAHLVSVWQ---PESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGV 381
            ...|.:||.|||...:   |.......|||.|:...:.||....:.  |||.||.:|....:.||
  Rat   262 PRKLLLTPWHLVFAARGPAPAPGDFAPVFARRLRAGDSVLAPGGDA--LRPARVARVAREEAVGV 324

  Fly   382 VAPLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWLPAKEQLHSSPKVVSSAQQQ 446
            .||||..||::||.|.||||||:.|...||...||:|||..|.|.||            ..|.|.
  Rat   325 FAPLTAHGTLLVNDVLASCYAVLESHQWAHRAFAPLRLLHALGALLP------------GGAVQP 377

  Fly   447 NGIHWYANALYKVKDYVL 464
            .|:|||:..||::.:.::
  Rat   378 TGMHWYSRLLYRLAEELM 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hhNP_001034065.1 HH_signal 99..243 CDD:279432 96/143 (67%)
Hint 254..465 CDD:279426 84/215 (39%)
Hint 258..400 CDD:238035 58/145 (40%)
DhhNP_445819.1 HH_signal 40..185 CDD:395862 96/144 (67%)
Hint 188..395 CDD:395856 86/220 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337226
Domainoid 1 1.000 230 1.000 Domainoid score I2361
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 358 1.000 Inparanoid score I2150
OMA 1 1.010 - - QHG50028
OrthoDB 1 1.010 - - D1169356at2759
OrthoFinder 1 1.000 - - FOG0001612
OrthoInspector 1 1.000 - - otm45983
orthoMCL 1 0.900 - - OOG6_104977
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1177
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.810

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