DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hh and ihha

DIOPT Version :10

Sequence 1:NP_001034065.1 Gene:hh / 42737 FlyBaseID:FBgn0004644 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001030165.2 Gene:ihha / 619520 ZFINID:ZDB-GENE-051010-1 Length:413 Species:Danio rerio


Alignment Length:412 Identity:191/412 - (46%)
Similarity:257/412 - (62%) Gaps:28/412 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LLIVLPMVFSPAH-SCGPGRGLGRHR-ARNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKF 133
            ||:...::|:|.: .||||||.|:.| .:.|.||..||..||::|.|..|||.:||.|.|:|.:|
Zfish     9 LLVGCALIFAPVNEGCGPGRGHGKRRPPKKLTPLNYKQFSPNVAEKTLGASGRIEGKITRNSERF 73

  Fly   134 KDLVPNYNRDILFRDEEGTGADRLMSKRCKEKLNVLAYSVMNEWPGIRLLVTESWDEDYHHGQES 198
            |:|.||||.||:|:|||.|||||||::|||:|||.||.||||.|||::|.|||.||||.:|.::|
Zfish    74 KELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNMWPGVKLRVTEGWDEDGNHFEDS 138

  Fly   199 LHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSISSHVHGCFTPES 263
            ||||||||.|.|||||::|||||||||||||||||.|.|:.||:|||||:.|:::...|||...:
Zfish   139 LHYEGRAVDITTSDRDRNKYGMLARLAVEAGFDWVYYESKAHIHCSVKSEHSVAAKTGGCFPASA 203

  Fly   264 TALLESGVRKPLGELSIGDRVLSMT---ANGQAVYSEVILFMDRNLEQMQNFVQLHTDGGAVLTV 325
            ...:|.|..|.|..|..|::||:.:   .:|..||||||.|:||:....:.|..:.||.||.|::
Zfish   204 LVTIEDGRLKTLESLQPGEKVLASSESDGSGTLVYSEVIAFLDRDPSARKQFFTIETDSGAKLSL 268

  Fly   326 TPAHLVSVWQ------PESQKLTFVFADRIEEKNQVLVRDVETGEL-RPQRVVKVGSVRSKGVVA 383
            |.|||:.|.:      ..:.:|..|||..: ...|.:|.....|:. |..||.::.....:||.|
Zfish   269 TAAHLLFVSEGNCSGSAANAELRSVFASDV-LPGQCVVSTQAAGQHGRLSRVSRIRMQEDRGVFA 332

  Fly   384 PLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWLPAKEQLHSSPKVVSSAQQQNG 448
            |||..||:|||.:.:||||.::...||||...|:|:|..   |        ..|    ...|..|
Zfish   333 PLTSHGTVVVNGIVSSCYAAVDQHWLAHWAFGPLRVLYN---W--------GGP----VGHQVTG 382

  Fly   449 IHWYANALYKVKDYVLPQSWRH 470
            ||||::.|:.:...||..:..|
Zfish   383 IHWYSSLLHWIGTQVLDPAHFH 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hhNP_001034065.1 HH_signal 85..243 CDD:460055 105/158 (66%)
Hint 254..465 CDD:460051 74/220 (34%)
ihhaNP_001030165.2 HH_signal 24..184 CDD:460055 105/159 (66%)
Hint 186..399 CDD:460051 77/228 (34%)

Return to query results.
Submit another query.