DRSC/TRiP Functional Genomics Resources

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Protein Alignment hh and ihha

DIOPT Version :9

Sequence 1:NP_001034065.1 Gene:hh / 42737 FlyBaseID:FBgn0004644 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001030165.2 Gene:ihha / 619520 ZFINID:ZDB-GENE-051010-1 Length:413 Species:Danio rerio


Alignment Length:412 Identity:191/412 - (46%)
Similarity:257/412 - (62%) Gaps:28/412 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LLIVLPMVFSPAH-SCGPGRGLGRHR-ARNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKF 133
            ||:...::|:|.: .||||||.|:.| .:.|.||..||..||::|.|..|||.:||.|.|:|.:|
Zfish     9 LLVGCALIFAPVNEGCGPGRGHGKRRPPKKLTPLNYKQFSPNVAEKTLGASGRIEGKITRNSERF 73

  Fly   134 KDLVPNYNRDILFRDEEGTGADRLMSKRCKEKLNVLAYSVMNEWPGIRLLVTESWDEDYHHGQES 198
            |:|.||||.||:|:|||.|||||||::|||:|||.||.||||.|||::|.|||.||||.:|.::|
Zfish    74 KELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNMWPGVKLRVTEGWDEDGNHFEDS 138

  Fly   199 LHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSISSHVHGCFTPES 263
            ||||||||.|.|||||::|||||||||||||||||.|.|:.||:|||||:.|:::...|||...:
Zfish   139 LHYEGRAVDITTSDRDRNKYGMLARLAVEAGFDWVYYESKAHIHCSVKSEHSVAAKTGGCFPASA 203

  Fly   264 TALLESGVRKPLGELSIGDRVLSMT---ANGQAVYSEVILFMDRNLEQMQNFVQLHTDGGAVLTV 325
            ...:|.|..|.|..|..|::||:.:   .:|..||||||.|:||:....:.|..:.||.||.|::
Zfish   204 LVTIEDGRLKTLESLQPGEKVLASSESDGSGTLVYSEVIAFLDRDPSARKQFFTIETDSGAKLSL 268

  Fly   326 TPAHLVSVWQ------PESQKLTFVFADRIEEKNQVLVRDVETGEL-RPQRVVKVGSVRSKGVVA 383
            |.|||:.|.:      ..:.:|..|||..: ...|.:|.....|:. |..||.::.....:||.|
Zfish   269 TAAHLLFVSEGNCSGSAANAELRSVFASDV-LPGQCVVSTQAAGQHGRLSRVSRIRMQEDRGVFA 332

  Fly   384 PLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWLPAKEQLHSSPKVVSSAQQQNG 448
            |||..||:|||.:.:||||.::...||||...|:|:|..   |        ..|    ...|..|
Zfish   333 PLTSHGTVVVNGIVSSCYAAVDQHWLAHWAFGPLRVLYN---W--------GGP----VGHQVTG 382

  Fly   449 IHWYANALYKVKDYVLPQSWRH 470
            ||||::.|:.:...||..:..|
Zfish   383 IHWYSSLLHWIGTQVLDPAHFH 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hhNP_001034065.1 HH_signal 99..243 CDD:279432 97/143 (68%)
Hint 254..465 CDD:279426 74/220 (34%)
Hint 258..400 CDD:238035 52/151 (34%)
ihhaNP_001030165.2 HH_signal 24..184 CDD:366456 105/159 (66%)
Hint 187..399 CDD:366452 76/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573904
Domainoid 1 1.000 230 1.000 Domainoid score I2380
eggNOG 1 0.900 - - E1_KOG3638
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 367 1.000 Inparanoid score I2110
OMA 1 1.010 - - QHG50028
OrthoDB 1 1.010 - - D1169356at2759
OrthoFinder 1 1.000 - - FOG0001612
OrthoInspector 1 1.000 - - otm25233
orthoMCL 1 0.900 - - OOG6_104977
Panther 1 1.100 - - LDO PTHR11889
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1177
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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