Sequence 1: | NP_001034065.1 | Gene: | hh / 42737 | FlyBaseID: | FBgn0004644 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_058917.1 | Gene: | Shh / 29499 | RGDID: | 3673 | Length: | 437 | Species: | Rattus norvegicus |
Alignment Length: | 432 | Identity: | 202/432 - (46%) |
---|---|---|---|
Similarity: | 266/432 - (61%) | Gaps: | 30/432 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 RCLSRLTSLVALLLIVLPMVFSPAHSCGPGRGLG-RHRARNLYPLVLKQTIPNLSEYTNSASGPL 122
Fly 123 EGVIRRDSPKFKDLVPNYNRDILFRDEEGTGADRLMSKRCKEKLNVLAYSVMNEWPGIRLLVTES 187
Fly 188 WDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSIS 252
Fly 253 SHVHGCFTPESTALLESGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHT 317
Fly 318 -DGGAVLTVTPAHLVSVWQPESQK-----LTFVFADRIEEKNQVLVRDVETGELR--PQRVVKVG 374
Fly 375 SVRSK--GVVAPLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWL-PAKEQ---- 432
Fly 433 -LHSSPKVVSSAQQQN---GIHWYANALYKVKDYVLPQSWRH 470 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
hh | NP_001034065.1 | HH_signal | 99..243 | CDD:279432 | 100/143 (70%) |
Hint | 254..465 | CDD:279426 | 80/229 (35%) | ||
Hint | 258..400 | CDD:238035 | 51/151 (34%) | ||
Shh | NP_058917.1 | Cardin-Weintraub. /evidence=ECO:0000250|UniProtKB:Q62226 | 33..39 | 1/5 (20%) | |
HH_signal | 40..185 | CDD:279432 | 100/144 (69%) | ||
Hint | 188..423 | CDD:279426 | 81/236 (34%) | ||
Hint | 199..349 | CDD:238035 | 51/151 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 230 | 1.000 | Domainoid score | I2361 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3638 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H30961 | |
Inparanoid | 1 | 1.050 | 358 | 1.000 | Inparanoid score | I2150 |
OMA | 1 | 1.010 | - | - | QHG50028 | |
OrthoDB | 1 | 1.010 | - | - | D1169356at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001612 | |
OrthoInspector | 1 | 1.000 | - | - | otm45983 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104977 | |
Panther | 1 | 1.100 | - | - | O | PTHR11889 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1177 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.840 |