DRSC/TRiP Functional Genomics Resources

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Protein Alignment hh and wrt-9

DIOPT Version :9

Sequence 1:NP_001034065.1 Gene:hh / 42737 FlyBaseID:FBgn0004644 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_508298.2 Gene:wrt-9 / 181931 WormBaseID:WBGene00006955 Length:553 Species:Caenorhabditis elegans


Alignment Length:63 Identity:16/63 - (25%)
Similarity:22/63 - (34%) Gaps:21/63 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 PMVFSPAHSCGPGRGLGRHRARNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVP 138
            |.||:|.... |..||.:               |||.::....:.|..||     |:...|.|
 Worm   353 PFVFAPLPPF-PQFGLPQ---------------PNLFQFPAPPAPPPFGV-----PQAPQLAP 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hhNP_001034065.1 HH_signal 99..243 CDD:279432 9/40 (23%)
Hint 254..465 CDD:279426
Hint 258..400 CDD:238035
wrt-9NP_508298.2 PHA03247 <299..400 CDD:223021 16/63 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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