DRSC/TRiP Functional Genomics Resources

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Protein Alignment hh and wrt-6

DIOPT Version :10

Sequence 1:NP_001034065.1 Gene:hh / 42737 FlyBaseID:FBgn0004644 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_508597.2 Gene:wrt-6 / 180638 WormBaseID:WBGene00006952 Length:593 Species:Caenorhabditis elegans


Alignment Length:212 Identity:57/212 - (26%)
Similarity:96/212 - (45%) Gaps:14/212 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 CFTPESTALLESGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTDGGAV 322
            ||:.:.....|.|: |.:.:|.|||:||||. .....||.||:|:.:..|::..|..:.|..|..
 Worm   394 CFSGDMEVETEDGI-KMIKDLKIGDKVLSMD-EAFVTYSPVIMFLHKRDEEIAEFNLIETANGHS 456

  Fly   323 LTVTPAHLVSVWQPESQK-LTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLT 386
            :.:|..||:.|....::. |..|.|..::..:.:.| ..::..:..::|.|:..|...|:.:|||
 Worm   457 IKLTDNHLIYVSDCRTRSDLKLVAAKEVKMDDCIHV-TTDSNVVIKKKVSKISKVIETGIYSPLT 520

  Fly   387 REGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWLPAKEQLHSSPKVVSSAQQQNGIHW 451
            ..|.|:||.|.|||          |..||...|..|..:.......:..:.....|:.::..:..
 Worm   521 STGDIIVNRVLASC----------HSNLALKSLQQTFFSLYKRTSSVFHNLMFFKSSTEEGDLPV 575

  Fly   452 YANALYKVKDYVLPQSW 468
            ....|..|.|..:|||:
 Worm   576 GVETLTSVMDLFIPQSF 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hhNP_001034065.1 HH_signal 85..243 CDD:460055
Hint 254..465 CDD:460051 54/207 (26%)
wrt-6NP_508597.2 PRK10263 <292..>381 CDD:236669
YppG 338..>372 CDD:372950
Hint 389..583 CDD:460051 52/201 (26%)
Blue background indicates that the domain is not in the aligned region.

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