DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31365 and ham

DIOPT Version :10

Sequence 1:NP_732827.1 Gene:CG31365 / 42736 FlyBaseID:FBgn0051365 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_724130.4 Gene:ham / 35135 FlyBaseID:FBgn0045852 Length:1108 Species:Drosophila melanogaster


Alignment Length:340 Identity:79/340 - (23%)
Similarity:125/340 - (36%) Gaps:96/340 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 SDVNIDGLELDEEVPAESGEDFREINMVGSDVVHTDNGEIYIINSASSE-------DQNQDSTPE 349
            |::.:||   ..:.|.:..|||    |.|..|:.........:.:|||.       ..:..|...
  Fly   242 SEMVVDG---RPKSPVQLNEDF----MNGGKVLAAAAAAAAAVVAASSSGAKSGGGGSSAPSDDR 299

  Fly   350 FDQDNGITSYNIKEDGEIQFSGEKPEEIEDVVVFNLGEEISQEQQVFSFHENVIIVEKEQNDRDE 414
            .|:||| :.|:                         |:|.|                        
  Fly   300 SDRDNG-SLYS-------------------------GDEFS------------------------ 314

  Fly   415 QTPLKRKRSSELVFKQESSCPQPKTGRI--TDTVKSF--QCHLCPVAFPTQKLLTRHHNTHIKGL 475
                |.|::|.|:          :.|.|  ||....|  :|.:|...:|...||    :.|:.|.
  Fly   315 ----KDKKNSSLI----------REGDIDFTDDENGFDIRCEVCDKVYPDLDLL----DDHLIGA 361

  Fly   476 KSGKGGTLKCPSCALQLSCASSL--KRHMIIHTGLKPFKCSECELSFSQREVLKRHMDT-HTGVK 537
            ...|.....|..|||:. |...|  |...|.|..::.:.|..|...|.....|:||:.. |.|.:
  Fly   362 HHFKQDEFPCKQCALRF-CHRPLLIKHEAISHNNIRKYSCENCSKVFCDPSNLQRHIRAYHVGAR 425

  Fly   538 RHQCPQCSSCFAQKSNLQQHIGRVHMGNS-RTHKCHLCHRSFNHVSGLSRHLVTHA--GVMFSCK 599
            .|.||:|...|...|.|:||   .|:.:| :...|.:|.:::...|.|.||...||  .:...|.
  Fly   426 CHPCPECGKTFGTSSGLKQH---QHIHSSVKPFACEVCSKAYTQFSNLCRHKRMHATCRMQIKCD 487

  Fly   600 QCGRQFNDRSAVQRH 614
            :|.:.|:..:::.:|
  Fly   488 KCNQSFSTLTSLTKH 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31365NP_732827.1 zf-AD 13..86 CDD:214871
PTZ00121 <110..354 CDD:173412 15/68 (22%)
zf-C2H2_8 454..542 CDD:464935 25/90 (28%)
C2H2 Zn finger 485..505 CDD:275368 8/21 (38%)
zf-H2C2_2 497..522 CDD:463886 7/26 (27%)
C2H2 Zn finger 513..533 CDD:275368 6/20 (30%)
zf-H2C2_2 526..550 CDD:463886 10/24 (42%)
C2H2 Zn finger 541..562 CDD:275368 8/20 (40%)
C2H2 Zn finger 571..591 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..617 CDD:275368 4/17 (24%)
hamNP_724130.4 PR-SET_ZFPM 131..253 CDD:380978 3/13 (23%)
C2H2 Zn finger 341..363 CDD:275368 7/25 (28%)
C2H2 Zn finger 371..392 CDD:275368 8/21 (38%)
SFP1 <391..479 CDD:227516 27/90 (30%)
C2H2 Zn finger 400..421 CDD:275368 6/20 (30%)
SUF4-like 403..>445 CDD:411020 14/41 (34%)
C2H2 Zn finger 403..421 CDD:411020 5/17 (29%)
C2H2 Zn finger 429..449 CDD:275368 9/22 (41%)
C2H2 Zn finger 457..477 CDD:275368 6/19 (32%)
C2H2 Zn finger 486..504 CDD:275368 4/17 (24%)
PTZ00121 <641..>728 CDD:173412
COG5048 935..>1028 CDD:227381
zf-C2H2 935..957 CDD:395048
C2H2 Zn finger 937..957 CDD:275368
zf-H2C2_2 949..973 CDD:463886
C2H2 Zn finger 965..986 CDD:275368
C2H2 Zn finger 994..1014 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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