DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31365 and ZNF260

DIOPT Version :9

Sequence 1:NP_732827.1 Gene:CG31365 / 42736 FlyBaseID:FBgn0051365 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001012774.1 Gene:ZNF260 / 339324 HGNCID:13499 Length:412 Species:Homo sapiens


Alignment Length:274 Identity:79/274 - (28%)
Similarity:123/274 - (44%) Gaps:39/274 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 GITSYNIKEDG------------EIQFSGEKPEEIEDVVVFNLGEEISQEQQVFSFHENVIIVEK 407
            |...|..||.|            |...:||||.|..     ..|...||:|.:.          |
Human   132 GTKPYACKECGKAFNGKAYLTEHEKIHTGEKPFECN-----QCGRAFSQKQYLI----------K 181

  Fly   408 EQNDRDEQTPLKRKRSSELVFKQESSCPQPKTGRITDTVKSFQCHLCPVAFPTQKLLTRHHNTHI 472
            .||....:.|.|.....:...::|:.....   ||....|.::|..|..||..:..|.||..:| 
Human   182 HQNIHTGKKPFKCSECGKAFSQKENLIIHQ---RIHTGEKPYECKGCGKAFIQKSSLIRHQRSH- 242

  Fly   473 KGLKSGKGGTLKCPSCALQLSCASSLKRHMIIHTGLKPFKCSECELSFSQREVLKRHMDTHTGVK 537
            .|.|     ...|..|....|..|:|..|..||.|.||:||:||...|.|::.|.:|.:.|||.|
Human   243 TGEK-----PYTCKECGKAFSGKSNLTEHEKIHIGEKPYKCNECGTIFRQKQYLIKHHNIHTGEK 302

  Fly   538 RHQCPQCSSCFAQKSNLQQHIGRVHMGNSRTHKCHLCHRSFNHVSGLSRHLVTHAGVM-FSCKQC 601
            .::|.:|...|::.::|..|: |:|.|: :.::|.:|.::|...|.|:.|:.:|.|.. :.|.:|
Human   303 PYECNKCGKAFSRITSLIVHV-RIHTGD-KPYECKVCGKAFCQSSSLTVHMRSHTGEKPYGCNEC 365

  Fly   602 GRQFNDRSAVQRHV 615
            |:.|:..|.:..|:
Human   366 GKAFSQFSTLALHM 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31365NP_732827.1 zf-AD 13..86 CDD:214871
vATP-synt_E 109..>244 CDD:304907
RRF <161..222 CDD:294170
zf-C2H2_8 454..530 CDD:292531 27/75 (36%)
C2H2 Zn finger 485..505 CDD:275368 6/19 (32%)
zf-H2C2_2 497..522 CDD:290200 12/24 (50%)
C2H2 Zn finger 513..533 CDD:275368 7/19 (37%)
zf-H2C2_2 526..550 CDD:290200 9/23 (39%)
C2H2 Zn finger 541..562 CDD:275368 6/20 (30%)
C2H2 Zn finger 571..591 CDD:275368 6/19 (32%)
C2H2 Zn finger 598..617 CDD:275368 6/18 (33%)
ZNF260NP_001012774.1 COG5048 25..406 CDD:227381 79/274 (29%)
C2H2 Zn finger 29..49 CDD:275368
C2H2 Zn finger 57..77 CDD:275368
C2H2 Zn finger 85..130 CDD:275368
C2H2 Zn finger 138..158 CDD:275368 4/19 (21%)
C2H2 Zn finger 166..186 CDD:275368 7/34 (21%)
C2H2 Zn finger 194..214 CDD:275368 2/22 (9%)
C2H2 Zn finger 222..242 CDD:275368 7/19 (37%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
C2H2 Zn finger 306..326 CDD:275368 6/20 (30%)
C2H2 Zn finger 334..354 CDD:275368 6/19 (32%)
C2H2 Zn finger 362..382 CDD:275368 6/18 (33%)
C2H2 Zn finger 390..410 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.