DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and Arfgap2

DIOPT Version :10

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_001159496.1 Gene:Arfgap2 / 77038 MGIID:1924288 Length:534 Species:Mus musculus


Alignment Length:438 Identity:94/438 - (21%)
Similarity:144/438 - (32%) Gaps:138/438 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 PAKRRIH--WEEFLKIPGNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLD 439
            |:|..|.  ::....||.|..|.||.:..|.||||..|:.|||:|||||||||||.|.:||..||
Mouse     5 PSKTEIQTIFKRLRAIPTNKACFDCGAKSPSWASITYGVFLCIDCSGVHRSLGVHLSFIRSTELD 69

  Fly   440 A-WESENVKVMMELGNEVVNRIYEAR--IGDDCGLKKPTEQCEIGVREAWIKAKYVERRFVCGMP 501
            : |....::.|...||......:...  :.:|.                  ..||..|.......
Mouse    70 SNWSWLQLRCMQVGGNANATAFFRQHGCMANDA------------------NTKYTSRAAQMYRE 116

  Fly   502 KPQELLASETAEVLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQKQRSIP---- 562
            |.::|                       ||     |.|:..||..|.       ....|.|    
Mouse   117 KIRQL-----------------------GS-----AALTRHGTDLWI-------DSMNSAPSHSP 146

  Fly   563 -KTLSD------DPSIYNTAKTGDELEDDDDDESINIPSMSLSISR------DDLLVIGDDLALD 614
             |..||      ....::||.|     |....:...:||.|.|:::      .|||......:|:
Mouse   147 EKKDSDFFTEHTQAPAWDTAAT-----DPSGTQQPALPSESSSLAQPEQGPNTDLLGTSPQASLE 206

  Fly   615 R--LETPG----------ILG----------------------SDQESTDGESDAESPEELPFSQ 645
            .  |...|          |:|                      |:|..|:.|..|:..|:|...|
Mouse   207 SMYLSAKGPSCTRELKSSIIGKKKPAAAKKGLGAKKGLGAQKVSNQSFTEIERQAQVAEKLREQQ 271

  Fly   646 LDANQLLYMASVVHNLPVMCMAFALGADKMWKNPQDRQRSFLHQAVISGSVMACEFLLLNGAAID 710
            ....:.....|:|.::.:......:...|..|..|:                      |.|...:
Mouse   272 AADAKKQAEESMVASMRLAYQELQIDRKKEEKKLQN----------------------LEGKKRE 314

  Fly   711 AVDEMGYSALHISTAKGHIAQVYLLLKHKAAYDLSSSDGKKALDIAVD 758
            ..:.:|...:..|:....:.....:::.:.  .||:...:..||:..|
Mouse   315 QAERLGMGLVSRSSISHSVLSEMQMIEQET--PLSAKSSRSQLDLFDD 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287
PH_ACAP 260..355 CDD:270070
ArfGap_ACAP 381..497 CDD:350064 40/120 (33%)
ANKYR <647..>768 CDD:440430 14/112 (13%)
ANK repeat 687..713 CDD:293786 2/25 (8%)
ANK repeat 715..746 CDD:293786 3/30 (10%)
Arfgap2NP_001159496.1 PLN03114 3..484 CDD:178661 94/438 (21%)
ArfGap_ArfGap2 5..124 CDD:350086 46/164 (28%)
YqiK <256..>318 CDD:441869 12/83 (14%)
Blue background indicates that the domain is not in the aligned region.

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