DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and Arap1

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_006508249.1 Gene:Arap1 / 69710 MGIID:1916960 Length:1452 Species:Mus musculus


Alignment Length:551 Identity:124/551 - (22%)
Similarity:198/551 - (35%) Gaps:177/551 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 GYLFKKKSKGFKTWCRRWFYLSDNQLVYRKRSNEDSFSVMEEDLR-ICSVRPVNEGDRRFCFEVI 325
            |:|.|...:|...:.:||..|..:.|.|.. ||:|::|.....:. ||.|.|:  ||::  ||||
Mouse   334 GWLDKNPPQGSYIYQKRWVRLDADYLRYFD-SNKDAYSKRFVPVACICRVAPI--GDQK--FEVI 393

  Fly   326 SPTKSHILQADSADMLSLWISALQHSIGAAIQHDSTHHSRPQS------TNAPNN---------- 374
            :..::...:|:|....:.|:.|||.   |.::|.:.......|      :..|:.          
Mouse   394 TNNRTFAFRAESDVERNEWMQALQQ---AVVEHRARFRLSSASVLGVRGSEQPDRAGSLELRGFK 455

  Fly   375 ------------------------------------------------------SLPAKRRIHWE 385
                                                                  |..|...:..|
Mouse   456 NKLYVAVTGDKVQLYKNLEEFHLGIGITFIDMNVGNVKEVDRRSFDLTTPYRIFSFSADSELEKE 520

  Fly   386 EFLK-IPG--------------------NAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVH 429
            ::|: :.|                    |.:|.||.:.:|.||||||.:.:|..|:|.||.||..
Mouse   521 QWLEAMQGAIAEALSTSEVAERIWAAAPNRFCADCGAAQPDWASINLCVVICKRCAGEHRGLGAG 585

  Fly   430 YSKVRSLTLD--AWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCE----IGVREAWIK 488
            .||||||.:|  .|....:::.:.|||...|..:.|.:       .|:|..|    .|.|...::
Mouse   586 VSKVRSLKMDRKVWTEALIQLFLHLGNGPGNHFWAANV-------PPSEALEPSSSPGARRYHLE 643

  Fly   489 AKYVE---RRF-------------VCGMPKPQELLASETAEVLSIDSGGVVEDGESGGS---GIA 534
            |||.|   ||:             :|......:|  :||..:|...:|.....|:....   .:|
Mouse   644 AKYREGKYRRYHPLFGNQEELDKALCAAVTTTDL--AETQALLGCGAGVSCFSGDPAAPTPLALA 706

  Fly   535 KRA--TLSLGGTRKWAVKKLRRRQKQRSIPK-------TLSDDPSIYNTAKTGDELEDDDDDESI 590
            ::|  ||.:...|.....::.|....:.:.|       |:|....:|.||..|..|:|....|..
Mouse   707 EQAGQTLQMEFLRNNQSTEVPRLDSVKPLEKHYSVTLPTVSHSGFLYKTASAGKPLQDRRAREEF 771

  Fly   591 NIPSMSLSISRDDLLVIGDDLALDRLETPGILGSDQESTDGESDAESPEELPFSQLDAN------ 649
               |....:..|.:|...::   :|..||          :||..|.....|..|.||.:      
Mouse   772 ---SRRWCVLSDGVLSYYEN---ERAVTP----------NGEIRASEIVCLAVSPLDTHGFEHTF 820

  Fly   650 ------QLLYM-----ASVVHNLPVMCMAFA 669
                  :.||:     |.:.|.. |.|:|.|
Mouse   821 EVYTEGERLYLFGLENAELAHEW-VKCIAKA 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287
PH 259..352 CDD:278594 29/90 (32%)
PH_ACAP 260..355 CDD:270070 29/93 (31%)
ArfGap 384..497 CDD:279720 45/155 (29%)
ANK 652..768 CDD:238125 8/23 (35%)
Ank_4 683..736 CDD:290365
ANK repeat 687..713 CDD:293786
ANK repeat 715..746 CDD:293786
Arap1XP_006508249.1 SAM_Arap1,2,3 6..68 CDD:188889
PH1_ARAP 331..422 CDD:270073 30/95 (32%)
PH2_ARAP 438..527 CDD:270074 5/88 (6%)
ArfGap_ARAP 537..652 CDD:350066 40/121 (33%)
PH3_ARAP 745..851 CDD:270076 30/123 (24%)
PH-like 864..954 CDD:388408
RhoGAP_ARAP 959..1137 CDD:239850
RA_ARAP1 1173..1265 CDD:340746
PH5_ARAP 1265..1404 CDD:270079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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