DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and Acap2

DIOPT Version :10

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_006248549.1 Gene:Acap2 / 619382 RGDID:1562939 Length:812 Species:Rattus norvegicus


Alignment Length:858 Identity:336/858 - (39%)
Similarity:486/858 - (56%) Gaps:93/858 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRATIEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGKEYVKNQSAFAMSLWD 65
            |:.|::||||||||||||..:.:.|.|:..||.:|:|::|||...:|:||.:......|...:.|
  Rat     1 MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCAANKQFMNGIRD 65

  Fly    66 LQQHFLDNKNAHNALGKLIHCFQEMNKFHTILLDQASRTVLKNLSVFVKDDINQVKDYKGHFLKV 130
            |.|:..::.....:|.|.....|||..|||||.||..|::...|..|||:|:.:.||.|..|.||
  Rat    66 LAQYSSNDAVVETSLTKFSDSLQEMINFHTILFDQTQRSIKAQLQNFVKEDLRKFKDAKKQFEKV 130

  Fly   131 SEGYDNALIKNAQASKNRPQEMQEAANILSASKSCFQHTALDYVNYITLAQARKVPSILSTLLDY 195
            ||..:|||:||||..:|:..|::||||||:|::.||:|.|||||..|.:.|:::...||.::|.:
  Rat   131 SEEKENALVKNAQVQRNKQHEVEEAANILTATRKCFRHIALDYVLQINVLQSKRRSEILKSMLSF 195

  Fly   196 YQACVTYYHQGFDLCNDFDEFFKNISEDLNALRGDYQQLEKAMQNRHMSVNRYCDSNTNS----- 255
            ..|.:.::|||:||.::...:.|::...|:.|..|..:.::.|:.:|.::.:...|:.:|     
  Rat   196 MYAHLAFFHQGYDLFSELGPYMKDLGAQLDRLVVDAAKEKREMEQKHSTIQQKDFSSDDSKLEYN 260

  Fly   256 --TSNKI--EGYLFKKKSKGFKTW-------CRRWFYLSDNQLVYRKRSNEDSFSVMEEDLRICS 309
              .:|.|  ||||||:.|..||||       .||||.:.:|||||:|:. :||.:|:.||||:|:
  Rat   261 VDAANGIVMEGYLFKRASNAFKTWNRKKPDHIRRWFSIQNNQLVYQKKF-KDSPTVVVEDLRLCT 324

  Fly   310 VRPVNEGDRRFCFEVISPTKSHILQADSADMLSLWISALQHSIGAAIQHDSTH------HSRPQS 368
            |:...:.:|||||||:|||||.:|||||..:...||.|:|.||..|.:.....      .|.|.:
  Rat   325 VKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKGDESEKLDKKSSPST 389

  Fly   369 TNAPNNSLPAKRRIHWEEFLK----IPGNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVH 429
            .:..:.|...::.:..|..|:    ||||..||||...:||||||||||||||||||:|||||||
  Rat   390 GSLDSGSESKEKLLKGESALQRVQCIPGNTSCCDCGLADPRWASINLGITLCIECSGIHRSLGVH 454

  Fly   430 YSKVRSLTLDAWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVR---EAWIKAKY 491
            :|||||||||.||.|.:|:|.||||:|:||:|||:: :..|:|||    :.|.|   ||:|:|||
  Rat   455 FSKVRSLTLDTWEPELLKLMCELGNDVINRVYEAKL-EKMGVKKP----QPGQRQEKEAYIRAKY 514

  Fly   492 VERRFVCGMPKPQELLASETAEVLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQ 556
            |||:||   .|...||:....|...|...  .||.....:.::....::       ||.....|:
  Rat   515 VERKFV---DKYSTLLSPSEQEKRIISKS--CEDQRLSHTRVSVHTPVA-------AVNSDEARR 567

  Fly   557 KQRSIPKTLSDDPSIYNTA------KTGDE-LEDDDDDESINIPSMSLSISRDDLLVIGDDLALD 614
            :....|..|....|.::|:      |:.|. ::...||...::||   ::|.:.|.         
  Rat   568 ESLFCPDELDSLFSYFDTSSKLRSIKSNDSGIQQCSDDGRESLPS---TVSANSLY--------- 620

  Fly   615 RLETPGILGSDQESTDGESDAESPEELPFSQLDANQL-----LYMASVVHNLPVMCMAFALGADK 674
                             |.:.|..|...|  ||:..|     ||.||...|||.|..|.|.|||.
  Rat   621 -----------------EPEGERQESSVF--LDSKHLNPGLQLYRASYEKNLPKMAEALAHGADV 666

  Fly   675 MWKNPQDRQRSFLHQAVISGSVMACEFLLLNGAAIDAVDEMGYSALHISTAKGHIAQVYLLLKHK 739
            .|.|..:.|.:.|.|||:.||::.|||||.|||.::..|..|...||.:|..||..||.|.||..
  Rat   667 NWANSDENQATPLIQAVLGGSLVTCEFLLQNGANVNQRDVQGRGPLHHATVLGHTGQVCLFLKRG 731

  Fly   740 AAYDLSSSDGKKALDIAVDQENADIVTLLRLTQLNDEIGPNDEYNGE--DETYKNVMKDFSKLPA 802
            |....:..:||..|.|||:..||||||||||.::|:|:..::...|:  ||||:::.:|||::.:
  Rat   732 ANQHATDEEGKDPLSIAVEAANADIVTLLRLARMNEEMRESEGLYGQPGDETYQDIFRDFSQMAS 796

  Fly   803 SQTRVL-RQRHDS 814
            :....| |.:.||
  Rat   797 NNPEKLNRFQQDS 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287 78/198 (39%)
PH_ACAP 260..355 CDD:270070 54/103 (52%)
ArfGap_ACAP 381..497 CDD:350064 74/122 (61%)
ANKYR <647..>768 CDD:440430 57/125 (46%)
ANK repeat 687..713 CDD:293786 14/25 (56%)
ANK repeat 715..746 CDD:293786 12/30 (40%)
Acap2XP_006248549.1 BAR_ACAP2 18..217 CDD:153322 78/198 (39%)
PH_ACAP 269..372 CDD:270070 54/103 (52%)
ArfGap_ACAP2 406..520 CDD:350076 74/118 (63%)
ANKYR <644..775 CDD:440430 61/130 (47%)
ANK repeat 672..705 CDD:293786 15/32 (47%)
ANK repeat 707..738 CDD:293786 12/30 (40%)

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