DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenB1A and appl1

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_021335332.1 Gene:appl1 / 571540 ZFINID:ZDB-GENE-081016-1 Length:708 Species:Danio rerio


Alignment Length:448 Identity:101/448 - (22%)
Similarity:185/448 - (41%) Gaps:53/448 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGKEYVKNQSAFAMSLWDLQ-Q 68
            :..||.|:|||:.|..:...|.|...:.....::.|......|:..|........:..|.|.: |
Zfish     7 LPIEETLEDSPQTRSLLGVFEEDAAAISSYFNQLFKAMQRIYDAQNELSAATHLTSKLLKDYEKQ 71

  Fly    69 HFL---DNKNAHNALGKLIHCFQEMNKFHTILLDQASRTVLKNLSVFVKDDINQVKDYKGHFLKV 130
            .|.   |::...:.|.:......|::..|.:|..|.:..::..::.|.:.|:.::...|..|...
Zfish    72 RFPLGGDDEVMSSTLQQFAKVIDELSSCHAVLSTQLADAMMFPITQFQERDLREILILKEVFQLA 136

  Fly   131 SEGYDNALIKNAQASKNRPQE--MQEAANILSASKSCFQHTALDYVNYITLAQARKVPSILSTLL 193
            |:.:|.|:.:.::.||.:..|  ..|....:..|:.....|.:.|...:.:.|.:|..::|..||
Zfish   137 SDDHDAAVHRYSRLSKRKENEKVKNEVMEDVYTSRKKQHETTMHYFASLNMLQYKKKIALLEPLL 201

  Fly   194 DYYQACVTYYHQGFD-LCNDFDEFFKNISEDLNALR----GDYQQLEKAMQN-RHMSVNRYC--- 249
            .|.||.::::..|.: |...:::|..||...:..:|    .|.:.:|:.:|: :..|...|.   
Zfish   202 GYMQAQISFFKLGSENLTQQWEDFLTNIGTSVQNVRREMDSDAEAMEQTIQDLKEASDPLYMPDP 266

  Fly   250 DSN---TNSTSNKIEGYLFKKKSKGF--KTWCRRWFYLSDNQLVYRKRSNEDSFSVMEEDLRICS 309
            |.|   .|....:..|||..:...|.  .:|.|::|:.....|:.:.|.......||  |:..||
Zfish   267 DPNRIPVNRNLTRKAGYLNTRNKTGLVSSSWERQYFFTQGGNLMSQSRGAVAGGLVM--DIDNCS 329

  Fly   310 VRPVNEGDRRFCFEV--ISPTKSHILQADSADMLSLWISALQH------------SIGAAIQHDS 360
            |..|:..||||||::  ....|:.:|||||......||:.:.:            .|.|.:...:
Zfish   330 VMAVDCEDRRFCFQITAFDGKKAAVLQADSRKDCEEWIATINNISKRIYLSENPEEIAARVNQSA 394

  Fly   361 THHSRPQSTNAPNNSLPAKRRIHWEEF-------LKIPGNAYCCDCRSPEPRWASINL 411
            .....|.         |:.::.| |.|       :|...:...|...|..|..:|::|
Zfish   395 LEAVTPS---------PSFQQRH-ESFRPNTQGKVKASRSGSQCSVGSESPALSSLSL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287 40/205 (20%)
PH 259..352 CDD:278594 30/108 (28%)
PH_ACAP 260..355 CDD:270070 31/110 (28%)
ArfGap 384..497 CDD:279720 8/35 (23%)
ANK 652..768 CDD:238125
Ank_4 683..736 CDD:290365
ANK repeat 687..713 CDD:293786
ANK repeat 715..746 CDD:293786
appl1XP_021335332.1 BAR_APPL1 20..234 CDD:153315 43/213 (20%)
BAR-PH_APPL 252..376 CDD:270067 36/125 (29%)
PTB_APPL 488..623 CDD:269980
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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