DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and git1

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_697386.4 Gene:git1 / 568935 ZFINID:ZDB-GENE-100408-5 Length:761 Species:Danio rerio


Alignment Length:464 Identity:93/464 - (20%)
Similarity:152/464 - (32%) Gaps:174/464 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 KIPGNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMMELG 453
            |:..:..|.||.:|:|.|:|||.|:.:|.||..||||||.|.|.|:.|....|....::::..|.
Zfish     4 KVQRSEVCADCSAPDPGWSSINRGVLICDECCSVHRSLGRHISIVKHLRHSGWPPSLLQMVQTLA 68

  Fly   454 NEVVNRIYEARIGD----DCGLKKPTEQCEI-GVREAWIKAKYVERRFVCGMPKPQELLASETAE 513
            :...|.|:|..:.|    ..|.:||..|.:: ..:..:|:|||....||..:|            
Zfish    69 SNGANSIWEHSLLDPAQVQSGRRKPNPQDKVHPTKSEFIRAKYQMLAFVHKLP------------ 121

  Fly   514 VLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQKQRSIPKTLSDDPSIYNTAKTG 578
              ..|..||.                                      .|.||  ..::::.:||
Zfish   122 --CRDDDGVT--------------------------------------TKDLS--KQLHSSVRTG 144

  Fly   579 DELEDDDDDESINIPSMSLSISRDDLLVIGDDLALDRLETPGILGSDQESTDGESDAESPEELPF 643
            .                                    |||                         
Zfish   145 S------------------------------------LET------------------------- 148

  Fly   644 SQLDANQLLYMASVVHNLPVMCM-AFALGADKMWKNPQDRQRSFLHQAVISGSVMACEFLLLNGA 707
                                 |: ..:|||...:.:| ::..:.||.|..:|.|:..|.|::.||
Zfish   149 ---------------------CLRLLSLGAQANFFHP-EKGTTPLHVAAKAGQVLQAELLVVYGA 191

  Fly   708 AIDAVDEMGYSALHISTAKGHIAQVYLLLKHKAAYDLSSSDGKKALDIAVDQENADIVTLLRLTQ 772
            ...|.|..|.:.:..:...||:.....|:  :..|:|:............|.:|...:    :.|
Zfish   192 DPGAPDINGRTPIDYARQAGHVELAERLV--ECQYELTDRLAFYLCGRRPDHKNGHYI----IPQ 250

  Fly   773 LNDEIGPNDEYNGED--ETYKNVMKDFSKLPASQTRVL------------RQRHDS--------N 815
            :.|...|.......|  |..|...|   ||.|...|:.            |:.:|:        :
Zfish   251 MADRARPKCPTQSLDLSELAKAAKK---KLQALNNRLFEELAMDVYDEVDRRENDAVWLTTQNHS 312

  Fly   816 TLESQRSSL 824
            ||.::||::
Zfish   313 TLVTERSAV 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287
PH 259..352 CDD:278594
PH_ACAP 260..355 CDD:270070
ArfGap 384..497 CDD:279720 38/112 (34%)
ANK 652..768 CDD:238125 24/116 (21%)
Ank_4 683..736 CDD:290365 14/52 (27%)
ANK repeat 687..713 CDD:293786 10/25 (40%)
ANK repeat 715..746 CDD:293786 6/30 (20%)
git1XP_697386.4 ArfGap 3..124 CDD:214518 41/133 (31%)
ANK <123..220 CDD:238125 30/219 (14%)
Ank_2 137..229 CDD:289560 27/176 (15%)
ANK repeat 137..165 CDD:293786 10/110 (9%)
ANK repeat 167..197 CDD:293786 10/29 (34%)
GIT_SHD <281..301 CDD:285690 2/19 (11%)
GIT_SHD 337..364 CDD:285690
GIT_CC 416..479 CDD:293167
GIT1_C 639..754 CDD:289013
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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