DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and smap2

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_001038260.1 Gene:smap2 / 556132 ZFINID:ZDB-GENE-060503-374 Length:418 Species:Danio rerio


Alignment Length:350 Identity:93/350 - (26%)
Similarity:144/350 - (41%) Gaps:100/350 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 LKIPGNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMMEL 452
            |.:..|.:|.||.:..|||||.||||.:||.|:|:||:||||.|:|:|:.||.|..|.::.:.|:
Zfish    20 LTLEENKFCADCYAKGPRWASWNLGIFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQSVQEM 84

  Fly   453 GNEVVNRIYEARIGDDCGLKKPTEQ-CEIGVREAWIKAKYVERRFVCGMPKPQELLASETAEVLS 516
            ||....|:|||.: .:|..:..|:| .||.:|:.:.|.||:::   |                :.
Zfish    85 GNAKARRLYEAFL-PECFQRPETDQAAEIFIRDKYDKKKYMDK---C----------------ID 129

  Fly   517 IDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQKQRSIPKTLSDDPSIYNTAKTGDEL 581
            |.|                                 .|::|..::.|   :.|.::...|    |
Zfish   130 IQS---------------------------------FRKEKSETVTK---EAPVVFEKMK----L 154

  Fly   582 EDDDDDESINIPSMSLSISRDDLLVIGDDLALDRL-ETPGILGSDQESTDGESDAE-SP-----E 639
            :.|:..:..:.|... |.|.:||      |.||.| ..|.:       |:|:..|| ||     .
Zfish   155 KKDESQQFKSTPKKQ-SQSVNDL------LGLDALAPQPPV-------TNGKPSAEISPALDLFS 205

  Fly   640 ELPFSQLDANQL------------LYMASVVHNLPVMCMAFALGADKMWKNPQDRQRSFLHQAVI 692
            .||.:..::|..            ...|||..||.:.........|...|..:|...| |:.:..
Zfish   206 SLPAAVSNSNSARSTPSSGSMPTGRVAASVPENLSLFLDPPTKSEDSGKKLSKDSILS-LYSSTA 269

  Fly   693 SGSVMACEFLLLNGAAIDAVDEMGY 717
            ..:.||....:..||.     :|||
Zfish   270 PQTNMAAHAGMYMGAT-----QMGY 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287
PH 259..352 CDD:278594
PH_ACAP 260..355 CDD:270070
ArfGap 384..497 CDD:279720 47/109 (43%)
ANK 652..768 CDD:238125 16/65 (25%)
Ank_4 683..736 CDD:290365 8/34 (24%)
ANK repeat 687..713 CDD:293786 5/25 (20%)
ANK repeat 715..746 CDD:293786 2/2 (100%)
smap2NP_001038260.1 COG5347 13..>275 CDD:227651 86/329 (26%)
ArfGap 13..115 CDD:279720 43/95 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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