DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and arfgap3

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_991160.1 Gene:arfgap3 / 402889 ZFINID:ZDB-GENE-040426-1 Length:498 Species:Danio rerio


Alignment Length:403 Identity:84/403 - (20%)
Similarity:135/403 - (33%) Gaps:111/403 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   393 NAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDA-WESENVKVMMELGNEV 456
            |..|.||.:..|.||||..|:.|||:|||.|||||||.|.:||..||: |....::.|...||..
Zfish    22 NKVCFDCSAKNPSWASITYGVFLCIDCSGTHRSLGVHLSFIRSTELDSNWSWFQLRCMQVGGNAS 86

  Fly   457 VNRIY----------------------------------------------EARIGDDCGLKK-- 473
            .|..:                                              :|.:.....|.|  
Zfish    87 ANAFFSQHGCSSSSAANAKYSSRAAALYRDKIRALANQATRQHGTELWLDAQAPLSPSSPLDKQE 151

  Fly   474 ------------PTEQCEIGVREAWIKAKYVERRFVCGMPKPQELLAS---ETAEVLSIDSGGVV 523
                        .|.|..|...:..::......:...| |..::|..|   ..||.||:......
Zfish   152 DFFTQHTQSALPDTVQLNISQSQKRVQDNNNNAKSEAG-PSVEQLSVSPVQSAAEPLSLLKKKPA 215

  Fly   524 EDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQKQRSIPKTLSD-------DPSIYNTAKTGDEL 581
            ...:|.|.|  :||.|   |.:|.:.:....:|::......|::       |.|:::.::....:
Zfish   216 AVRKSAGGG--RRAGL---GAQKVSSQSFTLQQRRAQAEDRLTEQRTSTAPDHSVWSVSRVQQAV 275

  Fly   582 E-------------DDDDDESINI-----PSMSLSISRDDLLVIGDDLALDRLETPGILGSDQES 628
            :             ....:|.:.:     ..:|.|::.|...:|..|  ...|.:..:...|::.
Zfish   276 DVQRSAQDSSSSRMKQQQEERLGMGLSGRSGLSHSVTEDMQTIIQQD--CPSLSSRRVYEEDEQQ 338

  Fly   629 TDGE------SDAESPEELPFSQLDANQLLYMASVVHNLPVMCMAFALGADKMWKNPQ----DRQ 683
            .|..      .:.....:|.|||..:.:...|.....    .|:.....|....|.||    |.|
Zfish   339 EDTHFCSRALDEGRGSSDLFFSQWSSEKQSRMKPESD----YCVEDEHRASASRKEPQSVCDDAQ 399

  Fly   684 RSFLHQAVISGSV 696
            |.|.....||..:
Zfish   400 RKFGDAKAISSDM 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287
PH 259..352 CDD:278594
PH_ACAP 260..355 CDD:270070
ArfGap 384..497 CDD:279720 39/164 (24%)
ANK 652..768 CDD:238125 12/49 (24%)
Ank_4 683..736 CDD:290365 5/14 (36%)
ANK repeat 687..713 CDD:293786 2/10 (20%)
ANK repeat 715..746 CDD:293786
arfgap3NP_991160.1 ArfGap 10..123 CDD:279720 33/100 (33%)
PLN03114 11..486 CDD:178661 84/403 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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