DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CenB1A and Git2

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_006530402.1 Gene:Git2 / 26431 MGIID:1347053 Length:761 Species:Mus musculus


Alignment Length:524 Identity:118/524 - (22%)
Similarity:192/524 - (36%) Gaps:152/524 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   396 CCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMMELGNEVVNRI 460
            |.||..|:|.|||:|.|..:|.||..||||||.|.|:||.|...||....::::..|.|...|.|
Mouse    11 CADCNGPDPSWASVNRGTFICDECCSVHRSLGRHISQVRHLKHTAWPPTLLQMVETLYNNGANSI 75

  Fly   461 YEARIGDDC----GLKKPTEQCEIGVREA-WIKAKYVERRFVCGMPKPQELLASETAEVLSIDSG 520
            :|..:.|..    |.:|...|.::...:| :|:|||....||..:|..::  .|.||:.||....
Mouse    76 WEHSLLDPASIMSGRRKANPQDKVHPNKAEFIRAKYQMLAFVHRLPCRED--DSVTAKDLSKQLH 138

  Fly   521 GVVEDG--------------------ESGGS--GIAKRATLSL-----------GGTR----KWA 548
            ..|..|                    |.|.:  .:|.:|...|           .||:    |..
Mouse   139 SSVRTGNLETCLRLLSLGAQANFFHPEKGSTPLHVASKAGQILQAELLAVYGADPGTQDSSGKTP 203

  Fly   549 VKKLRR------RQKQRSIPKTLSDDPSIYNTAKTGDELEDDDDDESINIPSMS---LSISRDDL 604
            |...|:      .::...|...|:|..:.|...:.    .|....:...||..:   ||:...:|
Mouse   204 VDYARQGGHHELAERLIEIQYELTDRLAFYLCGRK----PDHKSGQHFLIPQRADRRLSLDLSEL 264

  Fly   605 LV------------IGDDLAL------DRLETPGI-LGSDQESTDGESDAESPEELPFSQLDANQ 650
            ..            :.::||:      ||.||..: |.:...||                     
Mouse   265 AKAAKKKLQSLSNHLFEELAMDVYDEVDRRETDAVWLATQNHST--------------------- 308

  Fly   651 LLYMASVVHNLPVMCMAFALGADKMWKNP-------QDRQRSFLHQAVISGSVMACEFLLLNGAA 708
            |:...:||..|||              ||       |.||:        .....|.||..|   .
Mouse   309 LVTETTVVPFLPV--------------NPEYSSTRNQGRQK--------LARFNAHEFATL---V 348

  Fly   709 IDAVDE--MGYSALHISTAKGHIAQVYLLLKHKAAYDLSSSDGKKALDIAVDQENADIVTLLRLT 771
            ||.:.:  .......:|.:|.::..:...:..:.:.:...:| :...|.....|:.|:.|  |.:
Mouse   349 IDILSDAKRRQQGSPLSRSKDNVELILRTVSTQHSTESQDND-QPDYDSVASDEDTDVET--RAS 410

  Fly   772 QLNDEIGPNDEYNGEDETYKNVMKDFSKLPASQT----------------RVLRQRHDSNTLESQ 820
            :.|.:...:.:.:....|.:..|:..|.|.||:.                |:::::  ..||:|:
Mouse   411 KANRQKSLDSDLSDGPVTVQEFMEVKSALVASEAKRQQLMKVNNNLSDELRIMQKK--LQTLQSE 473

  Fly   821 RSSL 824
            .|||
Mouse   474 NSSL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287
PH 259..352 CDD:278594
PH_ACAP 260..355 CDD:270070
ArfGap 384..497 CDD:279720 40/105 (38%)
ANK 652..768 CDD:238125 23/124 (19%)
Ank_4 683..736 CDD:290365 9/54 (17%)
ANK repeat 687..713 CDD:293786 6/25 (24%)
ANK repeat 715..746 CDD:293786 2/30 (7%)
Git2XP_006530402.1 ArfGap_GIT2 1..111 CDD:350072 38/99 (38%)
Ank_2 137..229 CDD:372319 14/91 (15%)
ANK repeat 137..165 CDD:293786 2/27 (7%)
ANK repeat 167..197 CDD:293786 6/29 (21%)
GIT_SHD 268..296 CDD:369921 4/27 (15%)
GIT_SHD 332..360 CDD:369921 8/38 (21%)
GIT_CC 416..480 CDD:374629 13/64 (20%)
GIT1_C 640..754 CDD:371961
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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