DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and ltc2

DIOPT Version :10

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_593790.1 Gene:ltc2 / 2542216 PomBaseID:SPAC19A8.02 Length:1213 Species:Schizosaccharomyces pombe


Alignment Length:916 Identity:182/916 - (19%)
Similarity:314/916 - (34%) Gaps:287/916 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDS---GKEYVKNQSAFAMSLWDLQQHF 70
            ||..|||.||..:....:.|:...:.....:..||..::|   .:..|.:.|..||.. ::...|
pombe    21 ECSIDSPSFRASMYYLGNQIKAFNEWSHDFLCCCNKFIESIMAIEPIVASMSLNAMPS-NVASGF 84

  Fly    71 LDNKNAHNALGKLIHCFQEMNKFHTILLDQASRTVLKNLSVFVKDDINQVKDYK--------GHF 127
            .|...|..|   |:|........:.:.|.||     |||..|:...::..:|.|        ..|
pombe    85 FDPDYATTA---LLHGQDLFRSSYMVQLQQA-----KNLRKFIVAPLDLFRDSKVKPLLQLNDRF 141

  Fly   128 LKVSEGYDNALIKNAQA--SKNRPQEMQEAANILSASKSCFQHTALDYVNYITLAQA-------- 182
            ......||..:::.:..  ||:..|...||.::..|.||.|. .||.||..:|..::        
pombe   142 KAEQAKYDAEVLRYSSLGHSKDLSQMRDEAKSLYEARKSYFT-VALQYVVRVTSFRSSIDFIVIE 205

  Fly   183 --------------------RKVPSILSTLLDYYQACVTYYHQGFD-----LCNDFDEFFKNISE 222
                                |.:...|..||.|    .|...:.:.     :.|.||...|.|.:
pombe   206 SICKFSIETFRLTDRLHESNRHINDQLIRLLSY----ETKLKESYPSLKRIVSNVFDRIEKEILK 266

  Fly   223 ------DLNALRGDYQQLEKAMQNRHMSVNRYCDSNTNSTSNKIEGYLFK----KKSKGFKTWCR 277
                  :|:|.|.|.||:              |.:|    :.|.:|:|.:    .|:.....|.:
pombe   267 RVQPPTNLDAYRFDPQQI--------------CQTN----ATKRQGWLLRNISSSKADNKAIWRK 313

  Fly   278 RWFYLSDNQLVYRKRSNEDSFSVMEED---LRIC--SVRPVNEGDRRFCFEVISPTKSHILQADS 337
            .||::.:..:.|  ..|:.:..|.|.:   :.:|  ||.|.|.  |:|||::.:.:.|:||||::
pombe   314 YWFFVDNGYVGY--LINDANGGVFESEKIGVLLCKFSVLPSNH--RKFCFQIKTKSVSYILQAET 374

  Fly   338 ADMLSLWIS----ALQHSIGAAIQHD-------------STHHSRPQSTNAPNNSLP------AK 379
            ...:..|.|    |.:|.|.:.|..:             :|....|| .|..:||..      ..
pombe   375 HMEMLEWGSVINNAREHCINSGISANRILSPTLPSFSAKATSIINPQ-VNGRSNSTGKIGKNYRP 438

  Fly   380 RRIHWEEFLKIPGN-AYCCDCRS------PEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLT 437
            ||.:....|..|.| ......||      |.|::.|.::.              |..:..    .
pombe   439 RRTYSGRLLCGPNNYEVSTIMRSPTISTVPPPKYLSNSIN--------------GAKFLN----P 485

  Fly   438 LDAWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVREAWIKAKYVERRFVCGMPK 502
            |..|...|..::..|.:|.:..:.:                    :||:....           .
pombe   486 LAPWTLVNAPLITNLTHETITSLLD--------------------QEAFFHGN-----------S 519

  Fly   503 PQELLASETAEVLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQKQRSIPKTLSD 567
            |..|||:...   |::.|.|:|                                :|....:.|| 
pombe   520 PCALLANFWG---SVNYGHVLE--------------------------------RQNVYIEDLS- 548

  Fly   568 DPSIYNTAKTGDELEDDDDDESINIPSMSLSISRDDLLVIGDDLALDRLETPGILGSDQEST--- 629
            :||....|:   |:..:      .:||               :|.|...|..||.|..:.||   
pombe   549 NPSYKRLAR---EIHIE------KLPS---------------ELKLRNAEFRGIFGESEASTVLF 589

  Fly   630 --DGESDAESPEELPFSQLDANQLLYMASVVHNLPVMCMAFALGADKMWKNPQDRQRSFLHQAVI 692
              ...|..|....:|.......:.:|:...::.| |:...|.:.             |.|:....
pombe   590 VCRVCSKREDQIRMPGRMYCTMKGIYIYYNINGL-VLIEHFPIS-------------SILNVKQF 640

  Fly   693 SGSVMACEFLLLNGAAIDAVDEMGYSALHISTAKGHIAQVYLLLKHKAAYDLSSSDGKKALDIAV 757
            :.:  .|::..:|...|..|    ...|::.::|....::.:||.:..|                
pombe   641 AST--KCDYFYMNIQNIGTV----RFRLYLDSSKALTDRLNVLLCNYIA---------------- 683

  Fly   758 DQENADIVTLLRLTQLNDEIGPNDEYNGEDETYKNVMKDFSKLPASQTRVLRQRHDSNTLESQRS 822
            |:.|:.|..|..:.:|||:: ...|..|:|    |.:|.:...|:.:..::|:...|..|    :
pombe   684 DKPNSSIQLLSCIKRLNDDV-KRFERGGDD----NALKSYGVQPSQEDLLIRRGRSSRAL----T 739

  Fly   823 SLTNSD 828
            :|.|.:
pombe   740 NLINKN 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287 50/244 (20%)
PH_ACAP 260..355 CDD:270070 29/107 (27%)
ArfGap_ACAP 381..497 CDD:350064 17/122 (14%)
ANKYR <647..>768 CDD:440430 18/120 (15%)
ANK repeat 687..713 CDD:293786 4/25 (16%)
ANK repeat 715..746 CDD:293786 5/30 (17%)
ltc2NP_593790.1 BAR_SIP3_fungi 31..242 CDD:153293 46/224 (21%)
PH_SIP3 291..394 CDD:270098 29/106 (27%)
VASt 779..927 CDD:464975
Blue background indicates that the domain is not in the aligned region.

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