DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and Acap3

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_997106.1 Gene:Acap3 / 140500 MGIID:2153589 Length:833 Species:Mus musculus


Alignment Length:867 Identity:310/867 - (35%)
Similarity:472/867 - (54%) Gaps:116/867 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TIEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGKEYVKNQSAFAMSLWDLQQ 68
            |:|||||:|||||||..:.:.|:|:..:|.:|:|::|||:..:::||.||.....|...:.||.|
Mouse     2 TVEFEECIKDSPRFRATIDEVETDVVEIEAKLDKLVKLCSGMIEAGKAYVTTNRLFVSGVRDLSQ 66

  Fly    69 HFLDNKNAHNALGKLIHCFQEMNKFHTILLDQASRTVLKNLSVFVKDDINQVKDYKGHFLKVSEG 133
            ....:......|.:.....|||..:||||.|||.|:|.:.|..|||:|:.:.|:.|..|.||.|.
Mouse    67 QCQGDTVISECLQRFGDSLQEMVNYHTILFDQAQRSVRQQLHNFVKEDVRKFKETKKQFDKVRED 131

  Fly   134 YDNALIKNAQASKNRPQEMQEAANILSASKSCFQHTALDYVNYITLAQARKVPSILSTLLDYYQA 198
            .:.:|::||||.::||.|::||...|:.::.||:|.|||||..|.:.||:|...||.::|.:..|
Mouse   132 MELSLVRNAQAPRHRPHEVEEATGALTVTRKCFRHLALDYVLQINVLQAKKKFEILDSMLSFMHA 196

  Fly   199 CVTYYHQGFDLCNDFDEFFKNISEDLNALRGDYQQLEKAMQNRHMSVNR------------YCDS 251
            ..:::.||:.|.:..|.:.|.::.:|:.|..|....::.|:.:|.::.:            ..:.
Mouse   197 QYSFFQQGYSLLHQLDPYMKKLAAELDQLVIDSAVEKREMERKHAAIQQRTLLQDFSYDEPKVEF 261

  Fly   252 NTNSTSNKI-EGYLFKKKSKGFKTWCRRWFYLSDNQLVYRKRSNEDSFSVMEEDLRICSVRPVNE 315
            :.::.|..: ||||||:.|..||||.||||.:.::||||:|:. :|:.:|:.:|||:|||:|..:
Mouse   262 DVDAPSGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKKL-KDALTVVVDDLRLCSVKPCED 325

  Fly   316 GDRRFCFEVISPTKSHILQADSADMLSLWISALQHSIGAAIQH--DSTHHSRPQSTNAPNNSL-- 376
            .:|||||||:|||||.:|||||..:...|:.|:|.||.:|.:.  ||.:..|...|.:|:.|.  
Mouse   326 IERRFCFEVVSPTKSCMLQADSEKLRQAWVQAVQASIASAYRESPDSCYSERLDRTASPSTSSID 390

  Fly   377 ----PAKRRIHWEEFLK----IPGNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKV 433
                ..:|.:..|..|:    :.||:.|.||..|:|||||||||:.|||||||:|||||||.|||
Mouse   391 STTDSRERGVKGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKV 455

  Fly   434 RSLTLDAWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVREAWIKAKYVERRFVC 498
            ||||||:||.|.:|:|.||||..||:||||:. :..|::|||.......:|||||.||||::|: 
Mouse   456 RSLTLDSWEPELLKLMCELGNSTVNQIYEAQC-EGPGVRKPTASSSRQDKEAWIKDKYVEKKFL- 518

  Fly   499 GMPKPQELLASETAEVLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRR--------- 554
                 ::|.::...|                             ..|:|..:|.:|         
Mouse   519 -----RKLTSAPARE-----------------------------PPRRWRAQKCQRPHSSPHAPT 549

  Fly   555 -RQKQRSIPKTLSDDPSI--YNTAKT------GDELEDDDDDESI--------------NIPSMS 596
             |:|.|..|..    ||:  .::|.|      .|.|...|:.:|:              ::.|.|
Mouse   550 TRRKVRLEPVL----PSVAALSSAATMERKFRRDSLFCPDELDSLFSYFDAGAAGAGPRSLSSDS 610

  Fly   597 -LSISRD---DLLVIGDDLALDRL-ETPGILGSDQES-TDGESDAESPEELPFSQLDANQLLYMA 655
             |..|.|   |:|..|....:|.: |..|....:..| .|||::|.|..::  .:|....|.:.|
Mouse   611 GLGGSSDGSSDVLAFGTGSVVDSVTEEEGAESEESSSEVDGEAEAWSLADV--RELHPGLLAHQA 673

  Fly   656 SVVHNLPVMCMAFALGADKMWKNPQDRQRSFLHQAVISGSVMACEFLLLNGAAIDAVDEMGYSAL 720
            :...:||.:..|.|.||:..|.:..|..::.|.|||:.||::.|||||.|||.::..|.:|.:.|
Mouse   674 ARTRDLPALAAALAHGAEVNWADAADEGKTPLVQAVLGGSLIVCEFLLQNGADVNQRDSLGRAPL 738

  Fly   721 HISTAKGHIAQVYLLLKHKAAYDLSSSDGKKALDIAVDQENADIVTLLRLTQLNDEI-------- 777
            |.:|..|...||.|.||..|.......:.:..|.|||...||||||||||.::.:|:        
Mouse   739 HHATLLGRTGQVCLFLKRGADQHALDQEQQDPLTIAVQAANADIVTLLRLARMAEEMREAEAPPG 803

  Fly   778 --GPNDEYNGEDETYKNVMKDF 797
              ||....:..:..|:..:::|
Mouse   804 QPGPLPGSSPTELQYRRCIQEF 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287 72/198 (36%)
PH 259..352 CDD:278594 49/93 (53%)
PH_ACAP 260..355 CDD:270070 51/95 (54%)
ArfGap 384..497 CDD:279720 68/116 (59%)
ANK 652..768 CDD:238125 45/115 (39%)
Ank_4 683..736 CDD:290365 23/52 (44%)
ANK repeat 687..713 CDD:293786 14/25 (56%)
ANK repeat 715..746 CDD:293786 11/30 (37%)
Acap3NP_997106.1 BAR_ACAP3 16..215 CDD:153321 72/198 (36%)
PH 269..363 CDD:278594 50/94 (53%)
PH_ACAP 271..367 CDD:270070 52/96 (54%)
ArfGap 403..521 CDD:279720 69/124 (56%)
ANK 671..786 CDD:238125 45/114 (39%)
Ank_2 671..764 CDD:289560 35/92 (38%)
ANK repeat 700..731 CDD:293786 14/30 (47%)
ANK repeat 733..764 CDD:293786 11/30 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 191 1.000 Domainoid score I3233
eggNOG 1 0.900 - - E1_COG5347
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 496 1.000 Inparanoid score I1377
Isobase 1 0.950 - 0 Normalized mean entropy S2927
OMA 1 1.010 - - QHG55583
OrthoDB 1 1.010 - - D751525at2759
OrthoFinder 1 1.000 - - FOG0000653
OrthoInspector 1 1.000 - - otm43002
orthoMCL 1 0.900 - - OOG6_101039
Panther 1 1.100 - - LDO PTHR23180
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R258
SonicParanoid 1 1.000 - - X412
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.820

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