DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and smap2

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_002938524.3 Gene:smap2 / 100496482 XenbaseID:XB-GENE-5817085 Length:422 Species:Xenopus tropicalis


Alignment Length:309 Identity:86/309 - (27%)
Similarity:135/309 - (43%) Gaps:62/309 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 EFLKIPGNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMM 450
            |.|....|.:|.||.:..|||||.|:|:.:||.|:||||:||||.|:|:|:.||.|..|.::.|.
 Frog    18 ELLLREENKFCADCLAKGPRWASWNIGVFVCIRCAGVHRNLGVHISRVKSVNLDQWTQEQIQCME 82

  Fly   451 ELGNEVVNRIYEARIGDDCGLKKPTEQC-EIGVREAWIKAKYVERRF-VCGMPKPQELLASETAE 513
            |:||....|:|||.:.|:. ::..|:|. |:.:||.:.|.||::|.. :....|.::....::..
 Frog    83 EMGNGKAKRLYEAFLPDNF-IRPQTDQAVEVFIREKYEKKKYMDRSVDLSAFRKEKDTKWKKSES 146

  Fly   514 VLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQKQRSIPKT-------LSDDPSI 571
            ...|.||.|:.:                  ..|...||...:|.:.|.|||       |..|..:
 Frog   147 APEIKSGPVIFE------------------KVKLPQKKDETQQLKVSPPKTVEPVMDLLGLDVPV 193

  Fly   572 YNTAKTGDELEDDDDDESINIPSMSLSISRDDLLVIGD--DLALDRLETPGILGSDQE------- 627
            .|:...|.             ||.||   ..:|.:.|.  .:::.:...||:.||...       
 Frog   194 ANSVPNGK-------------PSTSL---EKELDLFGSVAPISISKSSQPGLPGSSGSVPENLNL 242

  Fly   628 --STDGESDAESPEELPFSQL------DANQLLYMASVVHNLPVMCMAF 668
              ...|:|:....::|....:      .|.|:...|..|...|.. ||:
 Frog   243 FPEPSGKSEDGGKKQLSKDSILSLYGSQAPQIPAQAGAVFMAPAQ-MAY 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287
PH 259..352 CDD:278594
PH_ACAP 260..355 CDD:270070
ArfGap 384..497 CDD:279720 49/112 (44%)
ANK 652..768 CDD:238125 5/17 (29%)
Ank_4 683..736 CDD:290365
ANK repeat 687..713 CDD:293786
ANK repeat 715..746 CDD:293786
smap2XP_002938524.3 ArfGap_SMAP2 16..122 CDD:350083 46/104 (44%)
Med15 270..>411 CDD:312941 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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