DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and acap2b

DIOPT Version :10

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_001096109.1 Gene:acap2b / 100124613 ZFINID:ZDB-GENE-050208-640 Length:264 Species:Danio rerio


Alignment Length:275 Identity:97/275 - (35%)
Similarity:159/275 - (57%) Gaps:16/275 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRATIEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGKEYVKNQSAFAMSLWD 65
            |:.|::||||||||||||..:.:.|.|:..||.:|:|::|||...:|:||.|......|...:.:
Zfish     1 MKITVDFEECLKDSPRFRATIEEVEGDVCELESKLDKLVKLCIGMIDAGKAYNTANKQFVSGIRE 65

  Fly    66 LQQHFLDNKNAHNALGKLIHCFQEMNKFHTILLDQASRTVLKNLSVFVKDDINQVKDYKGHFLKV 130
            |.|....:....::|.......|||..:||||.|||.|::...|..|:::|:.:.|:.|..|.||
Zfish    66 LAQQSATDDVIESSLSTFAENLQEMINYHTILFDQAQRSIKSQLQTFIREDLRKFKEAKKQFDKV 130

  Fly   131 SEGYDNALIKNAQASKNRPQEMQEAANILSASKSCFQHTALDYVNYITLAQARKVPSILSTLLDY 195
            ||..:.||.|||||.:|:..|::||:|||:|::.||:|..||||..|.:.|:::...||.::|.:
Zfish   131 SEEKEAALSKNAQAPRNKAHEVEEASNILNATRKCFRHIVLDYVLQINVLQSKRRSEILKSMLSF 195

  Fly   196 YQACVTYYHQGFDLCNDFDEFFKNISEDLNALRGDYQQLEKAMQNRHMSVNRYCDSNTNSTSNKI 260
            ..|.:|::|||:||.::.....|.::..|:.|..|..:..|.|:.:|.::.:           |:
Zfish   196 MYAHLTFFHQGYDLFSELQPLMKQLTGQLDQLVLDATKERKDMETKHSTIQQ-----------KV 249

  Fly   261 EGYLFKKKSKGFKTW 275
            :.:|     :|...|
Zfish   250 KDFL-----RGVNFW 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287 73/198 (37%)
PH_ACAP 260..355 CDD:270070 3/16 (19%)
ArfGap_ACAP 381..497 CDD:350064
ANKYR <647..>768 CDD:440430
ANK repeat 687..713 CDD:293786
ANK repeat 715..746 CDD:293786
acap2bNP_001096109.1 BAR 18..217 CDD:472257 73/198 (37%)
Blue background indicates that the domain is not in the aligned region.

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