DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and appl1

DIOPT Version :9

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:XP_031757118.1 Gene:appl1 / 100038055 XenbaseID:XB-GENE-855791 Length:708 Species:Xenopus tropicalis


Alignment Length:562 Identity:118/562 - (20%)
Similarity:230/562 - (40%) Gaps:101/562 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGKEYVKNQSAFAMSL------ 63
            :..||.|:|||:.|..:...|.|...:.....::........|:     :|:.:.|..|      
 Frog     7 LPIEETLEDSPQTRSLLGVFEEDAAAISSYSNQLFHAMRRIYDA-----QNELSAATHLTSKLLK 66

  Fly    64 -WDLQQHFL--DNKNAHNALGKLIHCFQEMNKFHTILLDQASRTVLKNLSVFVKDDINQVKDYKG 125
             ::.|:..|  |::...:.|.:......|::..|.:|..|.:..::..:..|.:.|:.::...|.
 Frog    67 EYEKQRFPLGGDDEVMTSTLQQFSKVIDELSSCHAVLSTQLADAMMFPIGQFKERDLKEILTLKE 131

  Fly   126 HFLKVSEGYDNALIKNAQASKNRPQE---MQEAANILSASKSCFQH-TALDYVNYITLAQARKVP 186
            .|...|..:|.|:.:.::.||.|..|   .:...::.:|.|.  || |.:.|...:...|.:|..
 Frog   132 VFQIASNDHDVAINRYSRLSKRRENEKTKFEATEDVYTARKK--QHQTMMHYFCALNTIQYKKKT 194

  Fly   187 SILSTLLDYYQACVTYYHQGFD-LCNDFDEFFKNISEDLNALRGDYQQLEKAMQNRHMSVN---- 246
            :||..||.|.||.:.::..|.: |.:..:||..||...:.::|   :::::.|:|...::.    
 Frog   195 AILEPLLGYMQAQINFFKMGSENLNSQLEEFLTNIGTSVQSVR---REMDQDMENMQQTIQDMEA 256

  Fly   247 ------------RYCDSNTNSTSNKIEGYLFKKKSKGF--KTWCRRWFYLSDNQLVYRKRSNEDS 297
                        :....|.|.|  :..|||..:...|.  .:|.|.:::.....|:.:.|.:...
 Frog   257 ASEPLYLPDPDLKKLPVNRNLT--RKAGYLNIRNKTGLVSSSWDRHYYFTQGGNLMSQARGDVAG 319

  Fly   298 FSVMEEDLRICSVRPVNEGDRRFCFEV--ISPTKSHILQADSADMLSLWISALQHSIGAAIQHDS 360
            ..||  |:..|||..::..|||:||::  ....||.||||:|......|||.: ::|...|... 
 Frog   320 GLVM--DIDNCSVMAIDSEDRRYCFQITAFDGKKSVILQAESKKDCEEWISTI-NNISKRIYLT- 380

  Fly   361 THHSRPQSTNAPNNS--------LPAKRRIHWEEFLKIPGNAYCCDCRSPEPRWASINLGITLCI 417
               ..|:.|.|..|.        .|:.::.|......:|...:.....|                
 Frog   381 ---ENPEETAARVNQSALEAVTPSPSFQQRHESMRPAVPSRPHATRTSS---------------- 426

  Fly   418 ECSGVHRSLGVHYSKVRSLTLDAWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCEIGV 482
              :|   |:|...|.:.:|:||:..:.:..:..    ::::.:.|.:.|      :|....:.|.
 Frog   427 --TG---SIGSDSSALTALSLDSIVAPDTPIQF----DIISPVSEDQSG------QPRTPGQTGR 476

  Fly   483 R-----EAWIKAK----YVERRFVCGMPKPQELLASETAEVL 515
            |     |:..|::    .:.:.|:.......|:.:.|:|||:
 Frog   477 RTNPFGESGEKSESEDSILHQLFIVRFLGSMEVKSDESAEVV 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287 44/212 (21%)
PH 259..352 CDD:278594 29/96 (30%)
PH_ACAP 260..355 CDD:270070 30/98 (31%)
ArfGap 384..497 CDD:279720 16/121 (13%)
ANK 652..768 CDD:238125
Ank_4 683..736 CDD:290365
ANK repeat 687..713 CDD:293786
ANK repeat 715..746 CDD:293786
appl1XP_031757118.1 BAR_APPL1 20..234 CDD:153315 47/220 (21%)
BAR-PH_APPL 252..376 CDD:270067 33/128 (26%)
PTB_APPL 487..622 CDD:269980 7/32 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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