DRSC/TRiP Functional Genomics Resources

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Protein Alignment CenB1A and acap3b

DIOPT Version :10

Sequence 1:NP_524458.1 Gene:CenB1A / 42735 FlyBaseID:FBgn0039056 Length:828 Species:Drosophila melanogaster
Sequence 2:NP_001076484.2 Gene:acap3b / 100009646 ZFINID:ZDB-GENE-070209-274 Length:843 Species:Danio rerio


Alignment Length:881 Identity:335/881 - (38%)
Similarity:484/881 - (54%) Gaps:112/881 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TIEFEECLKDSPRFRQFVSKEESDIEHLEQRLEKIIKLCNVAVDSGKEYVKNQSAFAMSLWDLQQ 68
            |::||||:|||||||..:.:.|:|:..:|.:|:|::|||:..:::|:.|......|...:.||..
Zfish     2 TVDFEECIKDSPRFRANIDEVETDVVEIEAKLDKLVKLCSGMIEAGRAYATANKLFVNGIRDLSH 66

  Fly    69 HFLDNKNAHNALGKLIHCFQEMNKFHTILLDQASRTVLKNLSVFVKDDINQVKDYKGHFLKVSEG 133
            |....:.....|.|.....||:..:|.||.|||.|:|.:.|..|||:|:.:.|:.|..|.||.|.
Zfish    67 HCKKEEMISECLEKCGESLQEIVNYHMILFDQAQRSVKQQLHSFVKEDVRKFKETKKQFDKVRED 131

  Fly   134 YDNALIKNAQASKNRPQEMQEAANILSASKSCFQHTALDYVNYITLAQARKVPSILSTLLDYYQA 198
            .:.|.:|||||.:|:|.|::||.:.|..::.||:|.|||||..|.:.||:|...||.::|.:.||
Zfish   132 MEIAQVKNAQAPRNKPHEVEEATSTLITTRKCFRHLALDYVLQINVLQAKKKFEILDSMLSFMQA 196

  Fly   199 CVTYYHQGFDLCNDFDEFFKNISEDLNALRGDYQQLEKAMQNRHMSVNR--------YCDS---- 251
            ....:||||:|.::.|.:.|.::.:|:.|..|....::.|:::|.::.:        |.||    
Zfish   197 QYGLFHQGFNLLDEIDPYMKKLAAELDQLVIDSAMEKREMEHKHATIQQRTLMQDFAYDDSKVEF 261

  Fly   252 NTNSTSNKI-EGYLFKKKSKGFKTWCRRWFYLSDNQLVYRKRSNEDSFSVMEEDLRICSVRPVNE 315
            |.::.:..: ||||||:.|..||||.||||.:.::||||:||. :|:.:|:.||||:|||:|..:
Zfish   262 NVDAPNGVVMEGYLFKRASNAFKTWNRRWFSIQNSQLVYQKRL-KDALTVVVEDLRLCSVKPCED 325

  Fly   316 GDRRFCFEVISPTKSHILQADSADMLSLWISALQHSIGAAIQHDSTHH--------SRPQSTNAP 372
            .:|||||||:|||||.:|||:|..:...||.|:|.||.:|.:..|.::        :.|.:::..
Zfish   326 IERRFCFEVVSPTKSCMLQAESEKLRQAWIQAVQASIASAYREISENYYIERLDRTASPSTSSID 390

  Fly   373 NNSLPAKRRIHWEEFLK----IPGNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKV 433
            :.|.|.:|.:..:..|:    :|||..||||...:||||||||||.|||||||:|||||||.|||
Zfish   391 SASEPRERVVRGDSILQRVQCLPGNEICCDCGQSDPRWASINLGILLCIECSGIHRSLGVHCSKV 455

  Fly   434 RSLTLDAWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVREAWIKAKYVERRF-- 496
            ||||||.||.|.:|:|.||||.|:|:|||... ::.|||||........:|||||||||||:|  
Zfish   456 RSLTLDTWEPELMKLMCELGNTVINQIYEGAC-EEQGLKKPGPNSSRQEKEAWIKAKYVERKFLK 519

  Fly   497 -VCGMPKPQELLASETAEVLSIDSGGVVEDGESGGSGIAKRATLSLGGTRKWAVKKLRRRQKQRS 560
             :||                   |..::|.|..               :..|:|||.||......
Zfish   520 KMCG-------------------SEALLEGGRK---------------SHHWSVKKCRRHNSSIR 550

  Fly   561 IPKT---LSDDPSIYNTAKTG----------DELEDDDDDESI----NIPSMSLSISRD------ 602
            .|||   ...|.:|.:.....          :.|...|:.:|:    :..|...|:|.|      
Zfish   551 APKTRRKYRHDAAIMSPGNLSAAAAAAKFRRESLFCPDELDSLFSYFDTGSGPRSLSSDSGLGGS 615

  Fly   603 -----DLLVIGDDLALDRLETPGILGSDQES--TDGESDAESPEELPFSQLDANQLLYMASVVHN 660
                 |:||.|.  .:|.:.......||:.|  .|.|.:|..||:  ..:||.|.||:.||...|
Zfish   616 TDGSTDILVFGS--VVDSVTEEECEDSDESSGEVDIEQEASDPED--GRELDPNTLLHKASRARN 676

  Fly   661 LPVMCMAFALGADKMWKNPQDRQRSFLHQAVISGSVMACEFLLLNGAAIDAVDEMGYSALHISTA 725
            :|||..|.|.|||....:.:|..:|.|.|||..||::||||||.|||.::..|..|...||.:|.
Zfish   677 MPVMAEALAHGADVNSVSEEDESKSPLIQAVTGGSLIACEFLLQNGADVNQRDIRGRGPLHHATC 741

  Fly   726 KGHIAQVYLLLKHKAAYDLSSSDGKKALDIAVDQENADIVTLLRLTQLNDEIGPNDEYNGEDETY 790
            .||..||.|.||..|.......||:..|.|||...||||||||||.::|:|:...|...|:.:  
Zfish   742 LGHTGQVCLFLKRGAGQMEVDEDGQDPLSIAVQAANADIVTLLRLARMNEEMREADGPLGQPD-- 804

  Fly   791 KNVMKDFSKLPASQTRVLRQRHDSNTLESQRSSLTN 826
                   :.:|.|..||.|:     :|.:...||::
Zfish   805 -------ASVPVSPLRVKRK-----SLRASPRSLSS 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CenB1ANP_524458.1 BAR_ACAPs 18..217 CDD:153287 73/198 (37%)
PH_ACAP 260..355 CDD:270070 53/95 (56%)
ArfGap_ACAP 381..497 CDD:350064 72/122 (59%)
ANKYR <647..>768 CDD:440430 57/120 (48%)
ANK repeat 687..713 CDD:293786 15/25 (60%)
ANK repeat 715..746 CDD:293786 12/30 (40%)
acap3bNP_001076484.2 None

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