DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rassf and Crip1

DIOPT Version :9

Sequence 1:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001128405.1 Gene:Crip1 / 691657 RGDID:1597237 Length:77 Species:Rattus norvegicus


Alignment Length:75 Identity:46/75 - (61%)
Similarity:53/75 - (70%) Gaps:1/75 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWKCHKCGKPVYFAERKQSIGYDWHPECLRCEECGKRLNPGQHAEHKSVPYCHVPCYGALFGPQL 65
            |.||.||.|.||||||..|:|.|||..||:||:|||.|..|.||||:..|||:.|||.|:|||:.
  Rat     1 MPKCPKCDKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYSAMFGPKG 65

  Fly    66 FGHGTRVESH 75
            ||.| ..|||
  Rat    66 FGRG-GAESH 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785 32/52 (62%)
UBQ 660..744 CDD:294102
Nore1-SARAH 762..799 CDD:293125
Crip1NP_001128405.1 LIM_CRIP 4..57 CDD:188862 32/52 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7882
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000284
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.710

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