Sequence 1: | NP_651126.3 | Gene: | Rassf / 42734 | FlyBaseID: | FBgn0039055 | Length: | 806 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001107017.1 | Gene: | Lima1 / 65970 | MGIID: | 1920992 | Length: | 753 | Species: | Mus musculus |
Alignment Length: | 560 | Identity: | 103/560 - (18%) |
---|---|---|---|
Similarity: | 174/560 - (31%) | Gaps: | 225/560 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 CHKCGKPVYFAERKQSIGYDWHPECLRCEECGKRLNPGQHAEHKSVPYCHVPCYGALFG-----P 63
Fly 64 QLFGH-------GTRVESHKSYGVKGAQKPTGAQANGPPLPRDHLESKLKVYNQFYDNKSLEIRS 121
Fly 122 REVNNRLVLEGALRVYWGVQGVIHLKEDDDQRILVRKRNSCRVSKAANESSSDKENEASESLAPP 186
Fly 187 TTTTAEVDQLSTDVSLSESMTFDSCSLNEISELPTTPEDASANTTANSKEQTNGNVCNDDEDTTT 251
Fly 252 TDSSGTLVEAPTASTSCVSSTLPSKLDRLEKLDWDDID-DLLQVERRHNDKDR--------IYET 307
Fly 308 MPVKLPSSQSS------SDSSPSKTSTETTTTTESSSTQSASTNTSSTDDFMTATGSLTANTNTQ 366
Fly 367 NTTTVSTTETSLDNFETCDDATLKPIDFEDFKRSVHQDYVNGANSFTEPNEGTLKRNQPIDPSRI 431
Fly 432 HDSLKLYGENSAMSKSFNCEHALRSIDPTLINDTMNLRSSVGSPHSAQRQYALQKSGSATVTSRD 496
Fly 497 QKKPYQQG---RQL-FEKGINRSKSGPSCFVYSDSDDDDE 532 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rassf | NP_651126.3 | LIM_TLP_like | 4..57 | CDD:188785 | 18/52 (35%) |
UBQ | 660..744 | CDD:294102 | |||
Nore1-SARAH | 762..799 | CDD:293125 | |||
Lima1 | NP_001107017.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 46..66 | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 82..186 | ||||
Required for interaction with NPC1L1. /evidence=ECO:0000269|PubMed:29880681 | 164..166 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 276..326 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 341..379 | ||||
LIM_Eplin_alpha_beta | 388..440 | CDD:188869 | 18/52 (35%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 467..493 | 5/26 (19%) | |||
Required for interaction with MYO5B. /evidence=ECO:0000269|PubMed:29880681 | 491..511 | 4/19 (21%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 505..669 | 44/296 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 682..703 | 5/32 (16%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG1700 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |