DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rassf and Hil

DIOPT Version :9

Sequence 1:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_611493.2 Gene:Hil / 37328 FlyBaseID:FBgn0050147 Length:818 Species:Drosophila melanogaster


Alignment Length:650 Identity:131/650 - (20%)
Similarity:223/650 - (34%) Gaps:193/650 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CHKCGKPVYFAERKQSIG-----YDWHPECLRCEECGKRLN-----PGQHAEHKSVPYC--HVPC 56
            |.:|.:.||..:|   :|     ..:|..|.:|..||.:|.     ..||.:.....||  |||.
  Fly    11 CLRCSETVYQVDR---VGPLKDFTFFHSGCFKCVHCGTKLTLKTYFNNQHKQDDKEVYCSSHVPK 72

  Fly    57 YG-------------ALFGP--------QLFG----------HGTRVESHKSYGVKGAQKPTGAQ 90
            .|             ||..|        |:.|          .|:|..:...||.:....|:...
  Fly    73 SGPGHLDQTSVGIRQALNAPRTNKFVNEQIRGTRSEVDGGPLGGSRQSTPNGYGSREISSPSQND 137

  Fly    91 ANGPPLPRD----HLESKL------KVYNQ-------FY----DNKSLEIRSREVNNRLVLEGAL 134
            ::......|    |:...|      |.||:       ||    :...||::.|:..:.|..:.|.
  Fly   138 SDYKYGRFDASALHIAHALKQTEIQKAYNKAREKPIDFYLAREEQAHLEMKHRKEEDDLYRKFAS 202

  Fly   135 RVYWGVQGVIHLKEDDDQRILVRKRNSCRVSKAANESSSDKEN-------EASESLAPPTTTTAE 192
            :.....:.:....:|:.:|.|.|..:......|.:..|.|:.|       :..|.|....|....
  Fly   203 KRAEEDRKIQDEFQDEWERELQRLTHKFEKELATSRRSRDEANILTMRHEQQKEDLEKNMTLRRS 267

  Fly   193 VDQLSTDVSLSESMTFDSCSL-----NEISELPTTPEDASANTTANSKEQTNGNVCNDDEDTTTT 252
            ..:.|....:.|...:::.:|     :|:.||      .||.   .|:...:.::..|||     
  Fly   268 KKKESITRKMLEHERYETAALVDRQSSEMLEL------ISAR---RSEYMQSESIFLDDE----- 318

  Fly   253 DSSGTL-----VEAPTASTSCVSS----TLPSKLDRLEKLDWDDIDDLLQVERRHNDKDRIYETM 308
            .|.|.:     :.||..:...||.    |.|        ::::|:|                   
  Fly   319 FSEGAVPVEYPLNAPIPAPPAVSKFQIYTDP--------IEFEDVD------------------- 356

  Fly   309 PVKLPSSQSSSDSSPSKTSTE--------TTTTTESSST-----QSASTNTSSTDDFM---TATG 357
              ::..|.:..|   .||.|:        .||..|.:.|     ...:.|....||.:   |..|
  Fly   357 --RIAISVAQED---QKTFTDLVRQLVGRCTTDIEKARTIFRWITVKNLNAMHFDDDLRGDTPMG 416

  Fly   358 SLTA-NTNTQNTTTVSTTETSLDNFETC-------DDATLKP-IDFED--FKRSVHQDYVNGANS 411
            .|.. ...|::...:.....|..... |       ..|..:| :.|:|  |:.|.:..||.||..
  Fly   417 LLRGIKYGTESYHVLFKRLCSYAGLH-CVVIKGYSKSAGYQPGVKFQDSRFRNSWNAVYVAGAWR 480

  Fly   412 FTEPNEGT---LKRNQPIDPSRIHDSLKLYGENSAMSKSFNCEHALRSIDPTLINDTMNLRSSVG 473
            |.:.|.|.   :...:.....|        |:|.::...::..:.|  .||         |..:.
  Fly   481 FVQCNWGARHLVNAKEAPKQGR--------GKNDSLRYEYDDHYFL--TDP---------REFIY 526

  Fly   474 SPHSAQRQYALQKSGSATVTSRD-QKKPYQQGRQLFEK-GINRSKSGPSCFVYSDSDDDDEATLR 536
            ..:..|.::.|.|   ..:|.|: :..|:.  |.||.: |::.:..|....|:  :||...||:|
  Fly   527 EFYPLQEEWQLLK---RPITLREFENLPFV--RSLFFRYGLHFADEGYGAVVF--TDDTGAATVR 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785 19/64 (30%)
UBQ 660..744 CDD:294102
Nore1-SARAH 762..799 CDD:293125
HilNP_611493.2 LIM_Ltd-1 11..70 CDD:188827 16/61 (26%)
BAR <147..>265 CDD:299863 23/117 (20%)
TGc 418..486 CDD:214673 15/68 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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