DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rassf and F20D12.7

DIOPT Version :9

Sequence 1:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_741455.1 Gene:F20D12.7 / 260102 WormBaseID:WBGene00017645 Length:158 Species:Caenorhabditis elegans


Alignment Length:163 Identity:28/163 - (17%)
Similarity:64/163 - (39%) Gaps:49/163 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   637 RRSGNRRSRTKLKRRCSINGHYYNRETSFFTPPYGSQMSVWVSSMV-----TTTEVINLVLEK-- 694
            ||.|..::   .:.:.:|..|...:.:......||..::|:.::::     ...:||...:::  
 Worm     9 RRGGQEQT---WREKWTIFRHNRRKASWHELVAYGIILNVFGAALLLIKAQLDKDVIKAAVDQKF 70

  Fly   695 ----YKVDSSPGNFSLFIVRDNGEQKRLKDDEYPLITRVTLGPHEDVARI------------FLV 743
                .||:|:.|         :.|::.:.:....|:..:|:|..  :|.:            :|.
 Worm    71 RDAGIKVNSTDG---------SDEEEEITEPSSVLLVMITMGGR--MANVVGTMKLYKGLGKYLS 124

  Fly   744 DSRK------TDEISNEVAQFLNLSLPECRAIL 770
            |.::      |:.|.|..|:      .||..:|
 Worm   125 DRKRKKFQSTTERIQNGEAE------TECTELL 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785
UBQ 660..744 CDD:294102 15/106 (14%)
Nore1-SARAH 762..799 CDD:293125 3/9 (33%)
F20D12.7NP_741455.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1700
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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