DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rassf and Rassf4

DIOPT Version :9

Sequence 1:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_835146.3 Gene:Rassf4 / 213391 MGIID:2386853 Length:322 Species:Mus musculus


Alignment Length:380 Identity:103/380 - (27%)
Similarity:172/380 - (45%) Gaps:95/380 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 LYGENSAMSKSFNCEHALRSID--------PTLINDTMNLRSSVGSPHSAQRQYALQKSGSATVT 493
            |..|..::.|::||.|..||..        ..:|...:|:...:..|...|.|            
Mouse    20 LKSELLSLLKTYNCYHEGRSFQLRHREEEGTLIIEGLLNIAWGLRRPIRLQMQ------------ 72

  Fly   494 SRDQKKPYQQGRQLFEKGINRSKSGPSCFVYSDSDDDDEATLRPQRMATIRRSDIPQRYIQIQMD 558
                                               ||.|....|.  ||.    :|:|...:|.:
Mouse    73 -----------------------------------DDRERVHLPS--ATW----VPERLSYLQKE 96

  Fly   559 CYPKENVAAASE---GESSRADAPSITSGAAAGDELTQTEDLYTASEGVDGPDGDGSAGLHVTED 620
            ..|:::.....|   ..:::|:....:|||..|:|                            |:
Mouse    97 ASPQDSKVPTEEPGTQPANKAEVSGDSSGALEGEE----------------------------EE 133

  Fly   621 GVVLRRPPRTGASAIKRRSGNR--RSRTKLKR-RCSINGHYYNRETSFFTPPYGSQMSVWVSSMV 682
            ...|.|.....:..|:|||.:|  ....|::| |.|||||:||.:||.|||.|||..:|.|:|.:
Mouse   134 VPQLMRTKSDASCIIQRRSKSRAPSEAQKIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTM 198

  Fly   683 TTTEVINLVLEKYKVDSSPGNFSLFIVRDNGEQKRLKDDEYPLITRVTLGPHEDVARIFLVDSRK 747
            ||.:|:.|:|.|::|:..|..|:|:.|.::|||.:|||.|||||:|:..||.|.:.:|||:::..
Mouse   199 TTQQVLTLLLNKFRVEDGPSEFALYTVHESGEQTKLKDCEYPLISRILHGPCEKIVKIFLMEADL 263

  Fly   748 TDEISNEVAQFLNLSLPECRAILERYDQELAREVAKIKERYAELRRRIVSRMESL 802
            ::|:.::|||::...:|...:.:|:..:|..||:.|:..::..||..::.|:|.|
Mouse   264 SEEVPHDVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMLQRLEQL 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785
UBQ 660..744 CDD:294102 41/83 (49%)
Nore1-SARAH 762..799 CDD:293125 8/36 (22%)
Rassf4NP_835146.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..161 16/92 (17%)
UBQ 176..262 CDD:294102 41/85 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848220
Domainoid 1 1.000 77 1.000 Domainoid score I8817
eggNOG 1 0.900 - - E1_KOG4239
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12926
Inparanoid 1 1.050 166 1.000 Inparanoid score I4168
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1043350at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43912
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22738
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5365
SonicParanoid 1 1.000 - - X2208
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.890

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