DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rassf and Mical1

DIOPT Version :10

Sequence 1:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_006512633.1 Gene:Mical1 / 171580 MGIID:2385847 Length:1207 Species:Mus musculus


Alignment Length:341 Identity:71/341 - (20%)
Similarity:123/341 - (36%) Gaps:99/341 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 CHKCGKPVYFAERKQSIGYDWHPECLRCEECGKRLNPGQHAEHKSVP-----YC--HVPCYGALF 61
            |..|||.:|..||....|:.:|..|..|..|...|.||.:.:|   |     ||  |:|      
Mouse   842 CELCGKHLYILERFCVDGHFFHRSCFCCHTCEATLWPGGYGQH---PGDGHFYCLQHLP------ 897

  Fly    62 GPQLFGHGTRVESHKSYGVKGAQKPTGAQAN------GPPLPR-DHLESKLKVYNQFYDNKSLE- 118
                  ...:.|:..:..::..:.||...:|      .||:.| ..:.|..:...:.....||| 
Mouse   898 ------QEDQKEADNNGSLESQELPTPGDSNMQPDPSSPPVTRVSPVPSPSQPARRLIRLSSLER 956

  Fly   119 IRSREVN--------------------NRLVLEGALRVYWGVQGVIHLKEDDDQRILVRKRNSCR 163
            :|...:|                    .|..|:.:. |.|||.  :...:..:           .
Mouse   957 LRLSSLNIIPDSGAEPPPKPPRSCSDLARESLKSSF-VGWGVP--VQAPQVPE-----------A 1007

  Fly   164 VSKAANESSSDKENEASESLAPPTTTTAEVDQLSTDVSLSESMTFDSCSLNEISELPTTPEDASA 228
            :.|..:|...::|.|..|...||  ...|::|  |.::|:::.       ..:::.||.    ..
Mouse  1008 IEKGDDEEEEEEEEEEEEEPLPP--LEPELEQ--TLLTLAKNP-------GAMTKYPTW----RR 1057

  Fly   229 NTTANSKEQTNGNVC---------NDDEDT-TTTDSSGTLVEAPTASTSCVSSTLPSKLDRLEKL 283
            .....:||:.....|         |:.|.| ...::.||.:|......|       |..::.:||
Mouse  1058 TLMRRAKEEEMKRFCKAQAIQRRLNEIEATMRELEAEGTKLELALRKES-------SSPEQQKKL 1115

  Fly   284 DWDDIDDLLQVERRHN 299
             |  :|.||::.::.|
Mouse  1116 -W--LDQLLRLIQKKN 1128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785 21/59 (36%)
RA_RASSF2_like 660..746 CDD:340482
SARAH_RASSF2-like 757..801 CDD:439180
Mical1XP_006512633.1 UbiH 242..>379 CDD:440419
CH_MICAL1 665..770 CDD:409045
LIM_Mical_like 842..895 CDD:188744 19/55 (35%)
bMERB_dom 1080..1205 CDD:463467 15/59 (25%)
Blue background indicates that the domain is not in the aligned region.

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