DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rassf and crip1

DIOPT Version :9

Sequence 1:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001165119.1 Gene:crip1 / 100125153 XenbaseID:XB-GENE-953194 Length:77 Species:Xenopus tropicalis


Alignment Length:78 Identity:48/78 - (61%)
Similarity:54/78 - (69%) Gaps:2/78 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWKCHKCGKPVYFAERKQSIGYDWHPECLRCEECGKRLNPGQHAEHKSVPYCHVPCYGALFGPQL 65
            |.||.||.|.|||||:..|:|.|||..||:||:|.|.|.||.||||...|||:.|||.|||||:.
 Frog     1 MPKCPKCQKEVYFAEKVSSLGKDWHRPCLKCEKCSKTLTPGSHAEHDGKPYCNQPCYAALFGPKG 65

  Fly    66 FGHGTRVESHKSY 78
            ||.| ..||| ||
 Frog    66 FGRG-GTESH-SY 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785 31/52 (60%)
UBQ 660..744 CDD:294102
Nore1-SARAH 762..799 CDD:293125
crip1NP_001165119.1 LIM_CRIP 4..57 CDD:188862 31/52 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 88 1.000 Domainoid score I7794
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000284
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5365
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.030

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