DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rassf and rassf2b

DIOPT Version :10

Sequence 1:NP_651126.3 Gene:Rassf / 42734 FlyBaseID:FBgn0039055 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001002195.1 Gene:rassf2b / 100006341 ZFINID:ZDB-GENE-041221-6 Length:316 Species:Danio rerio


Alignment Length:390 Identity:105/390 - (26%)
Similarity:184/390 - (47%) Gaps:89/390 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 QPIDPSRIHDSLKLYGENSAMSKSFNCEHALRSIDPTLINDTMNLRSSVGSPHSAQRQYALQKSG 488
            :.:|..:|.     .|||..:|||....| |::.:.....|.:.||         .|:       
Zfish     2 ESVDSDKIQ-----VGENKFVSKSVILSH-LKTYNVYFEGDALQLR---------HRE------- 44

  Fly   489 SATVTSRDQKKPYQQGRQLFEK------GINRSKSGPSCFVYSDSDDDDEATLRPQRMATIRRSD 547
                         ::|..:.|.      |::|    |......|..|    |.||:.:.|     
Zfish    45 -------------EEGELVIEGLLNVFWGVHR----PIRLQMQDEKD----TGRPRPLVT----- 83

  Fly   548 IPQRYIQIQMDCYPKENVAAASEGESSRADAPSITSGAAAGDELTQ--TEDLYTASEGVDGPDGD 610
                         |.:    .:..:|:....|.::....|.:|.::  :|:...|.||       
Zfish    84 -------------PLD----INTVKSNETHQPPVSIEVTAAEERSRDSSEEKQEAGEG------- 124

  Fly   611 GSAGLHVTEDGVVLRRPPRTGASAIKRRSGNRR--SRTKLKRRCSINGHYYNRETSFFTPPYGSQ 673
                 |  .:..:..|..||.:....|:.|.||  .|...:.|||.|||:||.:|:.|||..||.
Zfish   125 -----H--HESTLSDRLNRTRSDVSGRKIGGRRLGIRRVQRHRCSFNGHFYNHKTAVFTPAVGSV 182

  Fly   674 MSVWVSSMVTTTEVINLVLEKYKVDSSPGNFSLFIVRDNGEQKRLKDDEYPLITRVTLGPHEDVA 738
            .:|.|:|.:||::|:.::|.|:|:::||..|||::|..:||:.:||.:::||:.||..||.|.|:
Zfish   183 TNVRVNSCMTTSQVMRVLLNKFKIENSPDEFSLYLVHTSGERHQLKPNDHPLLVRVLQGPCEQVS 247

  Fly   739 RIFLVDSRKTDEISNEVAQFLNLSLPECRAILERYDQELAREVAKIKERYAELRRRIVSRMESLK 803
            ::||::..:.:|::.:|||::...||..::.:.:..:|..||:.|:|.||||::|.|...|::.|
Zfish   248 KMFLMEMDQVEEVTYDVAQYIKFELPVLQSFIAKLQEEEEREMQKLKTRYAEMQRIIKRCMQTSK 312

  Fly   804  803
            Zfish   313  312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RassfNP_651126.3 LIM_TLP_like 4..57 CDD:188785
RA_RASSF2_like 660..746 CDD:340482 36/85 (42%)
SARAH_RASSF2-like 757..801 CDD:439180 15/43 (35%)
rassf2bNP_001002195.1 Ubl1_cv_Nsp3_N-like 169..255 CDD:475130 36/85 (42%)
SARAH_RASSF2-like 266..310 CDD:439180 15/43 (35%)
Blue background indicates that the domain is not in the aligned region.

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